Job Description P32153 Confidence 100.00% Date Thu Jan 5 11:49:33 GMT 2012 Rank 38 Aligned Residues 320 % Identity 15% Template c3n5fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:n-carbamoyl-l-amino acid hydrolase; PDBTitle: crystal structure of l-n-carbamoylase from geobacillus2 stearothermophilus cect43 Resolution 2.75 Å

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		3	.	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	.	.	.	.	.	.	.	.	.	.	S	A	V	S	G	D	E	Q	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	I	T	F	D	G	L	G	S	F	V	A	R	K	G	N	K	G	.	.	.	P	K	V	A	V	V	G	H	M	D	E	V	G	F	M	V
Query Conservation												.	.	.	.	.	.	.	.	.	.																																										.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																										.	.	.																.
Template Conservation																																																																																	.
Template Sequence		W	Q	R	L	M	E	L	G	E	V	G	K	Q	P	S	G	G	V	T	R	L	S	F	T	A	E	E	R	R	A	K	D	L	V	A	S	Y	M	R	E	A	G	L	F	V	Y	E	D	A	A	G	N	L	I	G	R	K	E	G	T	N	P	D	A	T	V	V	L	V	G	S	H	L	D	S	V	Y	N	G	.
Template Known Secondary structure									T	T	T	T	B		T	T	S		B				S	S	S																	T	T							T	T										S	S	T	T	S													T	T	B	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	H	I	D	E	S	G	F	L	R	F	T	T	I	G	G	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	K	G	V	K	I	P	G	V	I	G	S	V	A	P	H	A	L	T	E	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	F	D	G	P	L	G	V	L	A	G	V	E	V	V	Q	T	M	N	E	H	G	V	V	T	H	H	P	I	E	V	V	A	F	T	D	E	E	G	A	R	F	R	F	G	M	I	G	S	R	A	M	A	G	T	L	P	P	E	A	L	E	C	R	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	T	T																	T	T				S	S								S		S	S		T	T	T	S											T				G	G	G	G	G		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
																												123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	Q	P	L	S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E	K	R	G	V	E	I	G	N	F	I	S	P	E	A	N	F	A	C	W	G	E	D	K	V	V	G	K	A	.	.	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		A	E	G	I	S	L	A	E	A	M	K	Q	A	G	L	D	P	D	R	L	P	Q	A	A	R	K	P	G	T	V	K	A	Y	V	E	L	H	I	E	Q	G	R	V	L	E	E	T	G	L	P	V	G	I	V	T	G	I	A	G	L	I	W	V	K	F	T	I	E	G	K	A	E	H	A	G	A	T	P	M	S
Template Known Secondary structure		S	S			B								T	T			G	G	G	G	G	G	G				T	T	S											S	S	S						T		S																								T	T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		D	N	R	I	G	C	A	M	M	A	E	L	L	Q	T	V	N	N	P	E	I	T	L	Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I	V	L	D	T	A	V	A	G	D	V	P	G	I	D	N	I	K	Y	P	L	K	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		L	R	R	D	P	M	A	A	A	A	Q	I	I	I	V	I	E	E	E	A	R	R	T	G	T	.	.	.	T	V	G	T	V	G	Q	L	H	V	Y	P	G	G	I	N	V	I	P	E	R	V	E	F	V	L	D	L	R	D	L	K	A	E	V	R	D	Q	V	W	K	A	I	A	V	R	A	E	T	I	A	K
Template Known Secondary structure		G																						T	S	S	.	.	.												S			T	T				S											S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
					247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure		.	.	.																																																																		.
Query SS confidence		.	.	.																																																																		.
Query Sequence		.	.	.	L	G	Q	G	P	G	L	M	L	F	D	K	R	Y	F	P	N	Q	K	L	V	A	A	L	K	S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	T	D	G	G	R	Y	N	V	M	G	G	G	R	P	V	V	A	L	C	L	P	.	T	R	Y	L	H	A	N	S	G	M	I
Query Conservation		.	.	.																																																																		.
Alig confidence		.	.	.																																								.														.	.											.
Template Conservation																																												.														.	.
Template Sequence		E	R	N	V	R	V	T	T	E	R	L	Q	E	M	P	P	V	L	C	S	D	E	V	K	R	A	A	E	A	A	C	Q	K	L	G	Y	P	S	F	W	L	P	.	S	G	A	A	H	D	S	V	Q	L	A	P	I	.	.	C	P	I	G	M	I	F	V	R	S	Q	D	G	V	S	H	S	P	A	E	W	S
Template Known Secondary structure				T																																T								.			S			T					T	T	T	.	.	S										G	G	G			S	S	T	T
Template Predicted Secondary structure																																												.														.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	A	D	Y	E	A	L	L	T	L	I	R	G	F	L	T	T	L	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	E	D	C	A	A	G	A	E	V	L	Y	H	T	V	W	Q	L	A	Q
Template Known Secondary structure																					T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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