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Job DescriptionP32153
Confidence100.00%DateThu Jan 5 11:49:33 GMT 2012
Rank20Aligned Residues342
% Identity13%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50 .........60........
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Query Sequence  IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKG. . . . . NKGPKVAVVGHMDEVGFM. . . . . . . . .
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Template Sequence  WQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFT
Template Known Secondary structure  TTS

BTT

TTTT


TTS



SS

SB



B


B
SS



TT
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   6970.........80.... .....90.........100.........110.........120.........130.........140...
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Query Sequence  . . . VTHIDESGFLRFTTIG. GWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREE.
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Template Sequence  QDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGMTGAFGLEAGWLKGDILLNTDSEQ
Template Known Secondary structure  TS


TTSSB


T
SS


S
S
SSSTTS

TTS


S




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   97..100.........110.........120.........130.........140.........150.........160.........170......
 
   144.....150.........160..... ....170....... ..180.........190.........200....
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Query Sequence  . . . . . . . . . . . . . . . . VEKRGVEIGNFISPEANFACWG. EDKVVGKALDNR. . IGCAMMAELLQTVNNPEITLYGVGSVE
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Template Conservation                       
     
     
 
 
    
          


   
     
              
Template Sequence  EGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQELDLRLVEFRGG
Template Known Secondary structure  TT





TT




BTTTGGGS



T

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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   205....210....
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Query Sequence  EEVGLRGAQT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  SLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVM
Template Known Secondary structure  S
TTB



GGGTTT






S

S

S

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   257..260.........270.........280.........290.........300.........310.........320.........330......
 
   215....220.........230.........240...... ...250.........260.........270.
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Query Sequence  . . . . . . . . . . . . . . . . SAEHIKPDVVIVLDTAVAGDVPGIDNIKYPLK. . . . . . . LGQGPGLMLFDKRYFPNQKLVAALK
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Template Conservation                                  
             
          
                

  
 
Template Sequence  RMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSGRSQVEGMLQSVAELAGAQIEFSGAYPGWKPDADSEIMAIFR
Template Known Secondary structure 
SSSTT
TTSSTT


B


SS
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   337..340.........350.........360.........370.........380.........390.........400.........410......
 
   272.......280.........290.........300.........310.........320.........330.........340....
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Query Sequence  SCAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTLTAE
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Template Sequence  DMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMVSFGPTIKFPHSPDEKVKIDTVQLFWDQMVALLEAIPEK
Template Known Secondary structure  TTTTTT

S

SS

GGGGGGSSSS





STTSTT
T

B
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   417..420.........430.........440.........450.........460.........470.........480.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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