Job Description P32153 Confidence 100.00% Date Thu Jan 5 11:49:33 GMT 2012 Rank 18 Aligned Residues 333 % Identity 17% Template c3ifeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. Resolution 1.55 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20											.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	S	A	V	S	G	D	E	Q	.	.	.	.	.	.	.	.	.	.	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	.	I	T	F	D	G	L	G	S	F	V	A	R	K	.	.	.	.	G	N	K	G	P	K	V	A	V	V	G	H	M	D	E	V	G	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.
Template Conservation
Template Sequence		I	E	R	F	T	R	Y	V	K	I	D	T	Q	S	N	E	D	S	H	T	V	P	T	T	P	G	Q	I	E	F	G	K	L	L	V	E	E	L	K	E	V	G	L	T	E	V	T	M	D	D	N	G	Y	V	M	A	T	L	P	A	N	T	D	K	D	V	P	V	I	G	F	L	A	H	L	D	T	A	T	D
Template Known Secondary structure										T	S			B			T	T			S	S	S	S	S																		T								T	T	S									B	S	S	S													B		T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
																																					68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	T	H	I	D	E	S	G	F	L	R	F	T	T	I	G	.	.	G	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	K	G	V	K	I	P	G	V	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		F	T	G	K	N	V	K	P	Q	I	H	E	N	F	D	G	N	A	I	T	L	N	E	E	L	N	I	V	L	T	P	E	Q	F	P	E	L	P	S	Y	K	G	H	T	I	I	T	T	D	G	T	T	L	L	G	A	D	D	K	A	G	L	T	E	I	M	V	A	M	N	Y	L	I	H	N	P	Q	I	K	H
Template Known Secondary structure		S			S	S							T	T			S	S						T	T	T	T					T	T	T		T	T	G	G	G	G	T	T	S							S	S	S																						T		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																																														.
Query SS confidence																	.	.																																														.
Query Sequence		G	S	V	A	P	H	A	L	T	E	K	Q	K	Q	Q	.	.	P	L	S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E	K	R	G	V	E	I	G	N	F	I	S	P	E	A	N	F	A	C	W	G	E	D	K	V	V	.	G	K	A	L	D	N	R	I	G	C	A	M	M	A	E	L	L
Query Conservation																	.	.																																														.
Alig confidence																	.	.																																														.
Template Conservation
Template Sequence		G	K	I	R	V	A	F	T	P	D	E	E	I	G	R	G	P	A	H	F	D	V	E	A	F	G	A	S	F	A	Y	M	M	D	G	G	P	L	G	G	L	E	Y	E	S	F	N	A	A	G	A	K	L	T	F	N	G	T	N	T	H	P	G	T	A	K	N	K	M	R	N	A	T	K	L	A	M	E	F	N
Template Known Secondary structure										S		G	G	G	T		T	G	G	G									S									S	T	T						B													B				G	G	G		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.											.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	N	N	P	E	I	T	L	Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I	V	L	D	T	A	V	A	G	D	V	P	G	I	D	N	I	K	Y	P	L	K	.	.	.	.	.	.	.	.	.	.	L	G	Q	G	P	G	L	M	L	F	D
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		G	H	L	P	V	E	E	A	P	E	Y	T	E	G	Y	E	G	F	Y	H	L	L	.	.	.	.	.	.	S	L	N	G	D	V	E	Q	S	K	A	Y	Y	I	I	R	D	F	D	R	K	N	F	E	A	R	K	N	T	I	E	N	I	V	K	Q	M	Q	E	K	Y	G	Q	D	A	V	V	L	E	M	N	D
Template Known Secondary structure			T	S		T	T		S	G	G	G			T	T								.	.	.	.	.	.						S	S											S	S																								G	G	G
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.							.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		258	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		K	R	Y	F	P	.	.	.	.	.	.	N	Q	K	L	V	A	A	L	K	S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	T	D	G	G	R	Y	N	V	M	G	G	G	R	P	V	V	A	L	C	L	P	T	R	Y	L	H	A	N	S	G	M	I	S	K	A	D	Y	E	A	L	L
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																									.													.	.
Template Conservation																																					.													.	.
Template Sequence		Q	Y	Y	N	M	L	E	K	I	E	P	V	R	E	I	V	D	I	A	Y	E	A	M	K	S	L	N	I	E	P	N	I	H	P	I	.	R	G	G	T	D	G	S	Q	L	S	Y	M	.	.	G	L	P	T	P	N	I	F	T	G	G	E	N	Y	H	G	K	F	E	Y	V	S	V	D	V	M	E	K	A	V
Template Known Secondary structure						T					G	G	G	T													T	T								B	.	S	S										T	.	.	T									S			S	T	T	S	T	T
Template Predicted Secondary structure																																					.													.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	R	G	F	L	T	T	L	T	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	I	I	E	I	A	R	R	F	E	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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