Job Description P32153 Confidence 100.00% Date Thu Jan 5 11:49:33 GMT 2012 Rank 35 Aligned Residues 295 % Identity 21% Template c3cpxC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:aminopeptidase, m42 family; PDBTitle: crystal structure of putative m42 glutamyl aminopeptidase2 (yp_676701.1) from cytophaga hutchinsonii atcc 33406 at 2.39 a3 resolution Resolution 2.39 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	S	A	V	S	G	D	E	Q	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	I	T	F	.	.	.	.	.	.	.	D	G	L	G	S	F	V	A	R	K	G	N	K	G	P	K	V	A	V	V	G	H	M	D	E	V	G	F	M	V	T	H	I	D	E	S
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.														.															.	.	.
Template Conservation																																																											.															.	.	.
Template Sequence		X	Q	L	L	K	E	L	C	S	I	H	A	P	S	G	N	E	E	P	L	K	D	F	I	L	E	Y	I	R	S	N	A	G	S	W	S	Y	Q	P	V	I	Y	A	D	N	D	L	Q	D	C	I	V	L	V	F	G	N	.	P	R	T	A	V	F	A	H	X	D	S	I	G	F	.	.	.	T	V	S	Y	N
Template Known Secondary structure											S			B	T	T																	G	G	G	S	S	S							S	G	G	G	T	T							S	S	.		S									B				.	.	.				S	T
Template Predicted Secondary structure																																																											.															.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	L	R	F	T	T	I	G	G	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	K	G	V	K	I	P	G	V	I	G	S	V	A	P	H	A	L	T	E	K	Q	K	Q	Q	P	L	S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E	K	R	G	V	E	I	G	N	F	I
Query Conservation
Alig confidence									.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation									.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		N	H	L	H	P	I	G	.	.	S	P	S	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	R	L	V	G	K	D	S	N	G	D	I	E	G	V	L	K	I	V	D	E	E	W	X	.	.	.	.	.	.	.	L	E	T	D	R	L	I	D	R	G	T	E	V
Template Known Secondary structure		T	B					S	.	.						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								T	T										G	G	G	S			.	.	.	.	.	.	.				S	S				T	T
Template Predicted Secondary structure									.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.			.	.	.	.	.	.																					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	A	N	F	A	C	W	G	E	D	K	V	V	G	K	A	L	D	N	R	I	G	C	A	M	M	A	E	L	L	Q	T	V	N	N	P	E	I	T	L	Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I	V	L	D	T	A	V	A	G	D	V
Query Conservation
Alig confidence													.																								.	.	.	.															.	.	.																								.
Template Conservation													.																								.	.	.	.															.	.	.																								.
Template Sequence		T	F	K	P	D	F	R	E	E	G	D	.	F	I	L	T	P	Y	L	D	D	R	L	G	V	W	T	A	L	E	L	A	K	T	L	.	.	.	.	E	H	G	I	I	A	F	T	C	W	E	E	H	G	.	.	.	G	G	S	V	A	Y	L	A	R	W	I	Y	E	T	F	H	V	K	Q	S	L	I	C	.
Template Known Secondary structure											T	T	.					T	T																		.	.	.	.		S							S	S	T	T	T	T	.	.	.			S																B					.
Template Predicted Secondary structure													.																								.	.	.	.															.	.	.																								.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	I	D	N	I	K	Y	P	L	K	L	G	Q	G	P	G	L	M	L	F	D	K	R	Y	F	P	N	Q	K	L	V	A	A	L	K	S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	T	D	G	G	R	Y	N	V	M	G	G	G	R	P	V	V	A	L	C	L	P	T	R	Y	L
Query Conservation
Alig confidence		.																							.
Template Conservation		.																							.
Template Sequence		.	D	I	T	W	V	T	E	G	V	E	A	G	K	G	V	A	I	S	X	R	D	R	.	X	I	P	R	K	K	Y	V	N	R	I	I	E	L	A	R	Q	T	D	I	P	F	Q	L	E	V	E	G	A	G	A	S	D	G	R	E	L	Q	L	S	P	Y	P	W	D	W	C	F	I	G	A	P	E	K	D	A
Template Known Secondary structure		.							S	S	S		T	T	S								S	S	.	S															T	T	S										S	S											S	S	S			B			B						B	S	T
Template Predicted Secondary structure		.																							.
Template SS confidence
			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	N	S	G	M	I	S	K	A	D	Y	E	A	L	L	T	L	I	R	G	F	L	T	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	T	P	N	E	C	V	H	K	K	D	I	E	S	X	V	G	L	Y	K	Y	L	X	E	K	L
Template Known Secondary structure		T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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