Job Description P32153 Confidence 98.23% Date Thu Jan 5 11:49:33 GMT 2012 Rank 72 Aligned Residues 326 % Identity 17% Template c2ek8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase; PDBTitle: aminopeptidase from aneurinibacillus sp. strain am-1 Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.
Predicted Secondary structure																		.	.																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	S	A	V	S	G	D	.	.	E	Q	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	I	T	F	D	G	L	.	.	.	.	.	.	.	.	G	S	F	V	A	R	K	G	N	K	G	P	K	V	A	.	.	.	.	.	.	.	.	.	V	V	G	H	M	D
Query Conservation																		.	.																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	T	I	Q	F	L	S	Q	A	P	R	V	A	G	S	P	E	E	L	K	A	V	R	Y	I	E	Q	Q	F	K	S	Y	G	Y	H	V	E	V	Q	P	F	Q	F	E	G	Y	T	A	P	S	E	V	T	L	K	I	G	T	E	K	K	E	G	E	A	F	T	Y	S	P	N	S	D	V	T	A	E	L	V
Template Known Secondary structure									T	T	S				T	T	S																	T	T																	S							T	T									B	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	G	F	M	V	T	H	I	D	E	S	G	F	L	R	F	T	T	I	G	G	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	K	G	V	K	I	P	G	V	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	P	H	A	L	T	E	K	Q	K	Q	Q	P	L
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	V	G	L	G	T	T	A	D	V	A	G	K	D	L	N	G	K	I	A	L	I	Q	R	G	N	I	S	F	A	D	K	V	R	N	A	A	K	Q	G	A	K	A	V	I	I	Y	N	N	T	D	G	K	L	N	G	T	L	G	G	S	D	A	S	F	V	A	A	V	G	I	T	K	Q	E	G	D	A	L	A
Template Known Secondary structure				T	T			T	T	T	T	T	T	S			T	T	S								S	S												T	T		S							S	S	S	S					B		S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E	K	R	G	V	E	I	G	N	F	I	S	P	E	A	N	.	.	.	.	.	.	.	.	.	.	.	F	A	C	W	G	E	D	K	V	.	.	.	V	G	K	A	L	D	N	R	I	G	C	A	M	M	A	E	L	L	Q	T	V	N	N	P
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		A	N	L	R	A	G	E	K	I	T	A	T	V	K	V	A	G	A	E	V	K	T	L	T	S	H	N	V	I	A	T	K	K	P	D	A	N	K	K	N	T	N	D	I	I	I	I	G	S	H	H	D	S	V	E	K	A	P	G	A	N	D	D	A	S	G	V	A	V	T	L	E	L	A	R	V	M	S	K	L
Template Known Secondary structure						T	T											S																			S	S	T	T																T	T				T	T	T	T															T	T	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
				194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	I	T	L	Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I	V	L	D	T	A	V	A	G	D	V	P	G	I	D	N	I	K	Y	P	L	K	L	G	Q	G	P	G	L	M	L	F	D	K	R	Y	F	P	N	Q	K	L	V	A	A	L	K
Query Conservation		.	.
Alig confidence		.	.																																													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	D	T	E	L	R	F	I	T	F	G	A	E	E	N	G	L	I	G	S	K	K	Y	A	A	S	L	S	E	D	E	I	K	R	T	I	G	M	F	Q	L	D	M	V	G	.	.	.	.	.	.	.	.	.	.	S	K	D	A	G	D	L	I	M	Y	T	I	D	G	K	K	N	R	V	T	D	L	G	A
Template Known Secondary structure				S	S								S	S	S	T	T	T	S								T	T																	S			.	.	.	.	.	.	.	.	.	.	B	T	T	S								T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.											.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																																							.	.											.	.	.
Query SS confidence																																							.	.											.	.	.
Query Sequence		S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	T	D	G	G	R	Y	N	V	M	G	G	G	R	P	V	V	A	L	.	.	C	L	P	T	R	Y	L	H	A	N	.	.	.	S	G	M	I	S	K	A	D	Y	E	A	L	L	T	L	I	R	G	F	L	T	T	L	T
Query Conservation																																							.	.											.	.	.
Alig confidence																	.	.												.	.								.	.											.	.	.
Template Conservation																	.	.												.	.
Template Sequence		A	A	S	S	R	L	S	G	V	L	P	Y	G	Q	E	.	.	G	R	S	D	H	E	S	F	H	A	L	.	.	G	I	P	A	A	L	F	I	H	A	P	V	E	P	W	Y	H	T	P	N	D	T	L	D	K	I	S	K	E	K	L	D	N	V	A	D	I	V	G	S	A	V	Y	Q	A	A
Template Known Secondary structure								T	S								.	.		S	S	T						T	T	.	.	T										S			T	T	T	T	S	T	T			G	G	G	B
Template Predicted Secondary structure																	.	.												.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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