Job Description P32153 Confidence 99.83% Date Thu Jan 5 11:49:33 GMT 2012 Rank 57 Aligned Residues 331 % Identity 17% Template c1y7eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: the crystal structure of aminopeptidase i from borrelia burgdorferi2 b31 Resolution 3.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		I	E	L	L	Q	Q	L	C	E	A	S	A	V	S	G	D	E	Q	E	V	R	D	I	L	I	N	T	L	E	P	C	V	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	F	D	G	L	G	S	F	V	A	R	K	G	N	K	G	P	K	.	.	.	.	V	A	V	V	G	H	M	D	E
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		L	N	F	S	E	S	Y	K	K	F	I	S	K	F	K	T	E	R	E	V	T	A	Y	A	L	D	K	A	K	K	L	G	F	I	N	A	E	E	K	K	N	L	X	P	G	D	K	I	F	Y	T	C	R	E	K	S	V	A	F	A	I	I	G	K	N	P	I	E	D	G	X	N	F	I	V	S	H	T	D	S
Template Known Secondary structure																	S														T	T	T				S	T	T						T	T						B		S	S	S		B							S	S		G	G	G								B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80			.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure									.	.	.										.	.						.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence									.	.	.										.	.						.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		V	G	F	M	V	T	H	.	.	.	I	D	E	S	G	F	L	R	F	.	.	T	T	I	G	G	.	.	.	.	.	.	W	W	N	Q	S	M	L	N	H	R	V	T	I	R	T	H	.	.	.	.	.	.	.	K	G	V	K	I	P	G	V	I	G	S	V	A	P	H	A	L	T	E	K	Q	K	Q	Q	P
Query Conservation									.	.	.										.	.						.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence									.	.	.										.	.						.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	L	D	A	K	P	S	P	I	S	E	E	N	E	L	T	F	I	K	T	N	Y	Y	G	G	I	K	K	Y	Q	W	L	S	T	P	L	S	I	R	G	V	V	F	L	K	N	G	E	K	V	E	I	N	I	G	D	N	E	N	D	P	V	F	V	I	P	D	I	L	N	L	K	I	L	I	G	S	L	P
Template Known Secondary structure			B					S	S						T	T									B	S	S			G	G	G	G	T	T												T	T									S	S	S	T	T				B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																													.
Query SS confidence																																									.	.	.	.	.	.	.	.																													.
Query Sequence		L	S	F	D	E	M	F	I	D	I	G	A	N	S	R	E	E	V	E	K	R	G	V	E	I	G	N	F	I	S	P	E	A	N	F	A	C	W	G	.	.	.	.	.	.	.	.	E	D	K	V	V	G	K	A	L	D	N	R	I	G	C	A	M	M	A	E	L	L	Q	T	V	N	N	P	.	E	I	T	L
Query Conservation																																									.	.	.	.	.	.	.	.																													.
Alig confidence																																									.	.	.	.	.	.	.	.																													.
Template Conservation
Template Sequence		I	E	T	K	E	K	N	K	V	K	L	A	T	L	Q	L	I	K	E	K	Y	K	I	E	E	E	D	F	V	S	S	E	I	E	I	V	P	A	G	T	A	K	D	V	G	F	D	K	A	L	I	G	A	Y	G	Q	D	D	K	I	C	V	F	T	S	L	E	S	I	F	D	L	E	E	T	P	N	K	T	A
Template Known Secondary structure			S		S	S	S																			T	T	T	T	S	S	S								S						T	T	T	T						S	S															S	S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.														.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	V	G	S	V	E	E	E	V	G	L	R	G	A	Q	T	S	A	E	H	I	K	P	D	V	V	I	V	L	D	T	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	D	V	P	G	I	D	N	I	K	Y	P	L	K	L	G	Q	G	P	G	L	M	L	F	D	K	R	Y	F	P	N	Q
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		I	C	F	L	V	D	K	E	E	I	D	S	R	Y	L	E	Y	F	V	S	D	X	I	F	K	I	K	K	S	E	Y	N	N	L	H	V	Q	K	A	L	W	N	S	K	S	I	S	A	D	V	C	A	A	I	N	P	E	Q	N	A	P	Q	L	G	Y	G	I	P	I	X	K	Y	.	.	.	.	.	T	D	A
Template Known Secondary structure						B		S	T	T			T	T														S	S	T	T			T																									T	T	S			T	T	S								.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350						.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	A	A	L	K	S	C	A	A	H	N	D	L	P	L	Q	F	S	T	M	K	T	G	A	T	D	G	G	R	Y	N	V	M	G	G	G	R	P	V	V	A	L	C	L	P	T	R	Y	L	H	A	N	S	G	M	I	S	K	A	D	Y	E	A	L	L	T	L	I	R	G	F	L	T	T
Query Conservation
Alig confidence																																					.	.
Template Conservation																																					.	.
Template Sequence		E	L	V	S	Y	I	R	Q	L	L	N	K	N	N	I	A	W	Q	V	A	T	L	G	K	G	G	T	V	A	K	F	L	A	G	Y	.	.	G	I	R	T	I	D	X	G	P	A	V	I	S	X	H	S	P	X	E	I	T	S	K	F	D	L	Y	N	A	Y	L	A	Y	K	A	F	Y	R	E
Template Known Secondary structure															T																						.	.	T											B	S	T	T	S	S	S																		T	T	T
Template Predicted Secondary structure																																					.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions