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Job DescriptionP32153
Confidence100.00%DateThu Jan 5 11:49:33 GMT 2012
Rank22Aligned Residues313
% Identity30%Templatec1vhoA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of a putative peptidase/endoglucanase
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50. ........60.........70.........80.
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Query Sequence  IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGN. KGPKVAVVGHMDEVGFMVTHIDESGFLRFT
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Template Sequence  GKLLXELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGIGKLAFFAHVDEIGFVV. SKVEGQFARLE
Template Known Secondary structure  S

BTT

GGG
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TTS


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B

.TT
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   6...10.........20.........30.........40.........50.........60.........70... ......80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  TIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANF
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Template Sequence  PVYASKVRI. . . . . . . . . YTKNGIERGVIGXLAPHLQDSESRKKVPTYDEIFVDLS. . . . . . LCERGVRVGDIAVIDQTA
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TS

TT

GG......GSSS


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   85....90... ......100.........110.........120.........130. ........140.........
 
   162.......170.........180.........190... ......200.........210.........220.........230.........
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Query Sequence  ACWGEDKVVGKALDNRIGCAMMAELLQTVNNP. . EITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGID
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Template Sequence  FETNG. KVVGKALDNRASCGVLVKVLEFLKRYDHPWDVYVVFSVQEETGCLGALTGAYEINPDAAIVXDVTFASEPPFSD
Template Known Secondary structure  TT.TTTT


SS
TTSSSTT




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   158.160.. .......170.........180.........190.........200.........210.........220.........230......
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  NIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANS
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Template Sequence  HI. . . . . . . ELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQEEAVG. GRTDFVQLVRN. . GVRTSLISIPLKYXHTPV
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TT


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BSTTSTT
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   237. .240.........250.........260.........270....... ..280........ .290.........300......
 
   320.........330.........340..
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Query Sequence  GMISKADYEALLTLIRGFLTTLT
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Template Sequence  EXVDPRDVEELARLLSLVAVELE
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   311........320.........330...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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