Return to main results Retrieve Phyre Job Id

Job DescriptionP76586
Confidence87.07%DateThu Jan 5 12:24:53 GMT 2012
Rank419Aligned Residues52
% Identity15%Templated2hs5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20...... ...30.........40.........50........
Predicted Secondary structure 

.








Query SS confidence 



















.































Query Sequence  NQQIRHHNKCVILELLYRQK. RANKSTLARLAQISIPAVSNILQELESEKRVV
Query Conservation     

  
   

  
    .  

 


    

  


 
   
   


 
Alig confidence 



















.































Template Conservation     
   
   
  
    
  
    

    


 


 

  
   
 
 
Template Sequence  TTRVAGILRDAIIDGTFRPGARLSEPDICAALDVSRNTVREAFQILIEDRLVA
Template Known Secondary structure  TSS
TT

T

TTS
Template Predicted Secondary structure 
















Template SS confidence 




















































   28.30.........40.........50.........60.........70.........80
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions