 |
Job Description | P76586 | Confidence | 95.77% | Date | Thu Jan 5 12:24:53 GMT 2012 |
Rank | 250 | Aligned Residues | 105 |
% Identity | 13% | Template | d1vhxa_ |
SCOP info | Ribonuclease H-like motif
| Ribonuclease H-like
| Putative Holliday junction resolvase RuvX
|
Resolution | 1.96 |
|
 |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | C | L | N | V | T | P | T | S | I | E | C | Q | V | A | N | A | C | L | S | P | K | G | E | F | E | Y | L | Q | I | D | A | P | T | P | Q | A | L | L | S | E | I | E | K | C | W | H | R | H | R | K | L | W | P | D | H | T | I | N | L | A | L | A | I | H | G | Q | V | D | P | V | T | G | V | S | Q | T | M | P |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | L | G | L | D | L | G | T | K | T | L | G | V | A | L | S | D | E | X | G | W | T | A | Q | G | I | E | T | I | K | I | N | E | A | E | G | D | Y | G | L | S | R | L | S | E | L | I | K | D | Y | . |
. |
. |
. |
. |
. |
T | I | D | K | I | V | L | G | F | P | K | N | X | N | G | T | V | G | P | R | G | E | A | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |  |  |  |
| B | G | G | G | T | B |
|
|  |  |  |  |  |  |  |  | T | T | S | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
| B | T | T | B |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | P | W | T | T | P | V | E | V | K | Y | L | L | E | E | K | L | G | I | R | V | M | V | D | N | D | C | V | M | L | A | L | A | E | K | W | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |
|
|   |   |
|   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
Q | T | F | A | K | V | L | E | T | T | Y | N | V | P | V | V | L | W | D | E | R | L | T | T | X | A | A | E | K | X | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|