Return to main results Retrieve Phyre Job Id

Job DescriptionP76586
Confidence95.64%DateThu Jan 5 12:24:53 GMT 2012
Rank256Aligned Residues49
% Identity14%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20...... ...30......... 40.........50.........60......
Predicted Secondary structure 

.




.









Query SS confidence 








.












.


























Query Sequence  ILELLYRQK. RANKSTLARLAQI. SIPAVSNILQELESEKRVVNIDDESQT
Query Conservation 

  
    .  

 


    
.
  


 
   
   


 
       
Alig confidence 








.












.


























Template Conservation 
       
  





    
  
  

  

  

 

 
 
     
 
Template Sequence  IRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRG
Template Known Secondary structure  SS


TT
SSTTS
SSSSS
Template Predicted Secondary structure 



















Template SS confidence 


















































   15....20.........30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions