 |
Job Description | P76586 | Confidence | 97.81% | Date | Thu Jan 5 12:24:53 GMT 2012 |
Rank | 86 | Aligned Residues | 122 |
% Identity | 17% | Template | d1bdga1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Hexokinase
|
Resolution | 2.60 |
|
 |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | |
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|
|  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | E | G | D | W | T | L | C | L | N | V | T | P | T | S | I | E | C | Q | V | A | N | A | C | L | S | . |
. |
. |
P | K | G | E | F | E | Y | L | Q | I | D | . |
. |
. |
A | P | T | P | Q | A | L | L | S | E | I | E | K | C | W | H | R | H | R | K | L | W | P | . |
. |
D | H | T | I | N | L | A | L | A | I | H | G |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
Template Sequence |   |
T | E | T | G | N | F | L | A | L | D | L | G | G | T | N | Y | R | V | L | S | V | T | L | E | G | G | K | S | P | R | I | Q | E | R | T | Y | C | I | P | A | E | K | M | S | G | S | G | T | E | L | F | K | Y | I | A | E | T | L | A | D | F | L | E | N | N | G | M | K | D | K | K | F | D | L | G | F | T | F | S | F |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| T | T | T | T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|  |  |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
150 | . | . | . | |
|
|
. | . | . | . | . | . | 160 | . | . | |
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
| . | . | . |
|
|  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | D | P | . |
. |
. |
V | T | G | V | S | Q | T | M | P | . |
. |
. |
Q | A | P | W | T | T | P | V | E | V | K | Y | L | L | E | E | K | L | G | . |
. |
. |
. |
. |
. |
I | R | V | M | V | D | N | D | C | V | M | L | A | L | A | E | K | W |
Query Conservation |   |
  |
|   |   | . | . | . |   |   |
|   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . | . | . | . |   |
|
|   |
|   |
|
|   |   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
Template Sequence |   |
P | C | V | Q | K | G | L | T | H | A | T | L | V | R | W | T | K | G | F | S | A | D | G | V | E | G | H | N | V | A | E | L | L | Q | T | E | L | D | K | R | E | L | N | V | K | C | V | A | V | V | N | D | T | V | G | T | L | A | S | C | A | L |
Template Known Secondary structure |   |
|  |  |  |  | T | T | T |  |  |  |  |
|
|
|
| T | T |
|
|
| B | T |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|