Job Description P76586 Confidence 100.00% Date Thu Jan 5 12:24:53 GMT 2012 Rank 13 Aligned Residues 279 % Identity 22% Template c3eo3B_ PDB info PDB header:isomerase, transferase Chain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein Resolution 2.84 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	L	C	L	N	V	T	P	T	S	I	E	C	Q	V	A	N	A	C	L	S	P	K	G	E	F	E	Y	L	Q	I	D	A	P	T	P	Q	A	L	L	S	E	I	E	K	C	W	H	R	H	R	K	L	W	P	D	H	T	I	N	L	A	L	A	I	H	G	Q	V	D	P	V	T	G	V	S	Q	T	M
Query Conservation
Alig confidence																																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	L	A	V	D	L	G	G	T	N	L	R	V	A	I	V	S	M	K	G	E	I	V	K	K	Y	T	Q	F	N	.	.	P	K	T	Y	E	E	R	I	N	L	I	L	Q	M	C	V	E	A	A	A	E	A	V	K	L	N	C	R	I	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S	S								T	T												.	.		S	S																						T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		P	Q	A	P	W	T	T	P	V	E	V	K	Y	L	L	E	E	K	L	G	I	R	V	M	V	D	N	D	C	V	M	L	A	L	A	E	K	W	Q	N	N	S	Q	E	.	R	D	F	C	V	I	N	V	D	Y	G	I	G	S	S	F	V	I	N	E	Q	I	Y	R	G	S	L	Y	G	S	G	Q	I	G	H
Query Conservation																																														.
Alig confidence		.	.	.	.	.																																								.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	I	S	T	D	L	R	T	P	L	S	D	T	L	H	L	P	V	W	V	D	N	D	G	N	C	A	A	L	A	E	R	K	F	G	Q	G	K	G	L	E	N	F	V	T	L	I	T	G	T	G	I	G	G	G	I	I	H	Q	H	E	L	I	H	G	S	S	F	C	A	A	E	L	G	H
Template Known Secondary structure		.	.	.	.	.																S																		T	S	T	T	T	T		S	S							S	S	S								T	T						T	T	S					G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V	N	P	D	G	V	V	C	D	C	G	R	Y	G	C	L	E	T	V	A	S	L	S	A	L	K	K	Q	A	R	V	W	L	K	S	Q	P	V	S	T	Q	L	D	P	E	K	L	T	T	A	Q	L	I	A	A	W	Q	S	G	E	P	W	I	T	S	W	V	D	R	S	A	N	A	I	G	L	S	L
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		L	V	V	S	L	D	G	P	D	C	S	C	G	S	H	G	C	I	E	A	Y	A	S	G	M	A	L	Q	R	E	A	K	K	L	H	D	E	D	L	.	L	L	V	E	G	M	S	A	V	G	A	L	H	L	I	Q	A	A	K	L	G	N	A	K	A	Q	S	I	L	R	T	A	G	T	A	L	G	L	G	V
Template Known Secondary structure			B			S	S			B		T	T	S		B	S	B						S														T	T		.	S			S	S															T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.		.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	F	L	N	I	L	N	I	N	Q	I	W	L	Y	G	R	S	C	A	F	G	E	N	W	L	N	T	I	I	R	Q	T	G	F	N	P	F	D	R	D	E	G	P	S	V	K	A	T	Q	I	G	F	G	Q	L	S	R	A	Q	Q	V	L	G	I	G	Y	L	Y	V	E	A
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.																.
Template Conservation																																			.	.	.	.	.	.	.	.																.
Template Sequence		V	N	I	L	H	T	M	N	P	S	L	V	I	L	S	G	V	L	A	S	H	Y	I	H	I	V	K	D	V	I	R	Q	Q	.	.	.	.	.	.	.	.	A	L	S	S	V	Q	D	V	D	V	V	V	S	D	L	.	V	D	P	A	L	L	G	A	A	S	M	V	L	D	Y
Template Known Secondary structure											S						S	T	T																.	.	.	.	.	.	.	.	S		G	G	G	T	T									.	S	S													T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.																.
Template SS confidence
		654	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.									.	.	.	690	.	.	.	.	.	.	.	.	.	700	.		.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions