Job Description P76586 Confidence 77.68% Date Thu Jan 5 12:24:53 GMT 2012 Rank 488 Aligned Residues 220 % Identity 15% Template c2v7yA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:chaperone protein dnak; PDBTitle: crystal structure of the molecular chaperone dnak from2 geobacillus kaustophilus hta426 in post-atp hydrolysis3 state Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	P	Q	A	L	L	S	E	I	E	K	C	W	H	R	H	R	K	L	.	W	P	D	H	T	I	N	L	A	L	A	I	H	G	Q	V	D	P	V	T	G	V	S	Q	T	M	P	Q	A	P	W	T	T	P	V	E	V	K	Y	L	L	E	E	K	L	G	I	R	V	M	V	D	N	D	C	V	M	L	A	L
Query Conservation																					.
Alig confidence																					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	Q	E	I	S	A	I	I	L	Q	Y	L	K	S	Y	A	E	D	Y	L	G	E	P	V	T	R	A	V	I	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	F	N	D	A	Q	R	Q	A	T	K	D	A	G	R	I	A	G	L	E	V	E	R	I	I	N	E	P	T	A	A	A	L
Template Known Secondary structure																							T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.														.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		A	E	K	W	Q	N	N	S	Q	E	R	D	F	C	V	I	N	V	D	Y	G	.	.	.	I	G	S	S	F	V	I	N	E	Q	I	Y	R	G	S	L	Y	G	S	G	Q	I	G	H	T	I	V	N	P	D	G	V	V	C	D	C	G	R	Y	G	C	L	E	T	V	A	S	L	S	A	L	K	K	Q	A	R
Query Conservation																							.	.	.
Alig confidence			.																				.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	.	Y	G	L	D	K	E	E	D	Q	T	I	L	V	Y	D	L	G	G	G	T	F	D	V	S	I	L	E	L	G	D	G	V	F	E	V	K	A	T	A	G	D	N	H	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	D	F	D	Q	V	I	I
Template Known Secondary structure			.	T	T	G	G	G	S		S										S	S											T	T											T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																									.	.	200	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																																				.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	W	L	K	S	Q	P	V	S	T	Q	L	D	P	E	K	L	T	T	A	Q	L	I	A	A	W	Q	S	G	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	I	T	S	W	V	D	R	S	A	N	A	I	G
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	L	V	N	Q	F	K	Q	E	H	G	I	D	L	S	K	D	K	M	A	L	Q	R	L	K	D	A	A	E	K	A	K	K	E	L	S	G	V	T	Q	T	Q	I	S	L	P	F	I	S	A	N	E	N	G	P	L	H	L	E	M	T	L	T	R	A	K	F	E	E	L	S	A	H	L	V	E	R	T	M
Template Known Secondary structure													S			G	G	G																			T	T	T		S													T	T																		T						T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.						.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		L	S	L	Y	N	F	L	N	I	L	N	.	.	.	.	.	I	N	Q	I	W	L	Y	G	R	S	C	A	F	G	E	N	W	L	N	T	I	I	R	Q	T	G	F	N	P	F	D	R	D	E	G	P	S	V	K	A	T	Q	I	G	F	G	Q	L	S	R	A	Q	Q	V	L	G	I	G	Y	L	Y
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.														.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	V	R	Q	A	L	Q	D	A	G	L	T	P	A	D	I	D	K	V	I	L	V	G	G	S	T	R	I	.	P	A	V	Q	E	A	I	K	R	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	E	P	H	K	G	V	N	P	D	E	V	V	A	I	G	A	A	I	Q	G
Template Known Secondary structure												T			G	G	G		S						S	G	G	G	G		.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			B			S		T	T	T
Template Predicted Secondary structure																															.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.															.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions