Job Description P76586 Confidence 97.74% Date Thu Jan 5 12:24:53 GMT 2012 Rank 93 Aligned Residues 264 % Identity 12% Template c2ivoC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:up1; PDBTitle: structure of up1 protein Resolution 2.9 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		W	T	L	C	L	N	V	T	P	T	S	I	E	C	Q	V	A	N	A	C	L	S	P	K	G	E	F	E	Y	L	Q	I	D	A	P	T	.	.	.	.	.	.	.	.	.	.	.	P	Q	A	L	L	S	E	I	E	K	C	W	H	R	H	R	K	L	W	P	D	H	T	I	N	L	A	L	A	I	.	H	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.																															.
Alig confidence																				.																		.	.	.	.	.	.	.	.	.	.	.															.																.
Template Conservation																				.																																											.
Template Sequence		L	A	L	G	I	E	G	T	A	H	T	L	G	I	G	I	V	S	.	E	D	K	V	L	A	N	V	F	D	T	L	T	T	E	K	G	G	I	H	P	K	E	A	A	E	H	H	A	R	L	M	K	P	L	L	R	K	A	L	S	E	.	A	G	V	S	L	D	D	I	D	V	I	A	F	S	Q	G	P	G
Template Known Secondary structure									S	S	S									.	S	S													S	S		S																									.		T			T	T	T										S	S
Template Predicted Secondary structure																				.																																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	D	P	V	T	G	V	S	Q	T	M	P	Q	A	P	W	T	T	P	V	E	V	K	Y	L	L	E	E	K	L	G	I	R	V	M	V	D	N	D	C	V	M	L	A	L	A	E	K	W	Q	N	N	S	Q	E	R	D	F	C	V	I	N	V	D	Y	G	I	G	S	S	F	V	I	N	E	Q	I	Y	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Sequence		L	G	.	.	.	.	.	.	.	.	.	.	.	.	P	A	L	R	V	V	A	T	A	A	R	A	L	A	V	K	Y	R	K	P	I	V	G	V	N	H	C	I	A	H	V	E	I	T	K	M	F	.	.	G	V	K	D	P	V	G	L	Y	V	S	G	G	N	T	Q	V	L	A	L	E	G	G	R	Y	R	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																	T	T															G	G	G	G	G	.	.	T			S								S	S									T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template SS confidence
		80	.													.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.																				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	L	Y	G	S	G	Q	I	G	H	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	P	D	G	V	V	C	D	C	G	R	Y	G	C	L	E	T	V	A	S	L	S	A	L	K	K	Q	A	R	V	W	L	K	S	Q	P	V	S	T	Q	L	D	P	E	K	L	T
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		F	G	E	T	L	D	I	G	I	G	N	A	I	D	V	F	A	R	E	L	G	L	G	F	P	G	G	P	K	V	E	K	L	A	E	K	G	E	K	Y	I	E	L	P	Y	A	V	K	G	M	D	L	S	F	S	G	L	L	T	E	A	I	R	K	Y	R	S	G	K	Y	R	V	.	.	.	.	.	.	.	.
Template Known Secondary structure					B	S	S	S													T	T			S	S											T			S										T	T																	T			S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Q	L	I	A	A	W	Q	S	G	E	P	W	I	T	S	W	V	D	R	S	A	N	A	I	G	L	S	L	Y	N	F	L	N	I	L	N	I	N	Q	I	W	L	Y	G	R	S	C	A	F	G	E	N	W	L	N	T	I	I	R	Q	T	G	F	N	P	F	D	R	D	E	G	P	S	V	K	A	T	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																							.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																																							.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	E	D	L	A	Y	S	F	Q	E	T	A	F	A	A	L	V	E	V	T	E	R	A	V	A	H	T	E	K	D	E	V	V	L	V	G	G	V	A	.	A	N	N	R	L	R	E	M	L	R	I	M	T	E	D	R	G	I	K	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.																													S						S	G	G	G	.	G																T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																							.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		371	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		I	G	F	G	Q	L	.	.	.	S	R	A	Q	Q	V	L	G	I	G	Y	L	Y	V	E	A
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		F	F	V	P	P	Y	D	L	C	R	D	N	G	A	M	I	A	Y	T	G	L	R	M	Y	K
Template Known Secondary structure							G	G	G	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions