Job Description P76586 Confidence 99.62% Date Thu Jan 5 12:24:53 GMT 2012 Rank 45 Aligned Residues 234 % Identity 15% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		T	L	C	L	N	V	T	P	T	S	I	E	C	Q	V	A	N	A	C	L	S	P	K	G	E	F	E	Y	L	Q	I	.	D	A	P	T	P	Q	A	L	L	S	E	I	E	K	C	W	H	R	H	R	K	L	W	P	D	H	T	I	N	L	A	L	A	I	H	G	Q	V	D	P	V	T	G	V	S	Q	T	M
Query Conservation																																	.
Alig confidence																																	.																																											.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	T	P	A	K	A	.	.	.	.	.	.
Template Known Secondary structure									S	S									T	T													T	T	T	S										T	T	T	T					T	T	S	T	T	T									T	T			T	T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		P	Q	A	P	W	T	T	P	V	E	V	K	Y	L	L	E	E	K	L	G	.	.	I	R	V	M	V	D	N	D	C	V	M	L	A	L	A	E	K	W	Q	N	N	S	Q	E	R	D	F	C	V	I	N	V	D	Y	G	I	G	S	S	F	V	I	N	E	Q	I	Y	R	G	S	L	Y	G	S	G	Q	I	G
Query Conservation																						.	.
Alig confidence		.	.	.	.	.	.	.	.													.	.																		.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	P	X	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	L	C	.	.	.	.	.	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	S	P	L	G	Y	I	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.											S	T	T		S																T	.	.	.	.	.	T	T	S								S	S	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
										76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.																				.	300
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	I	V	N	P	D	G	V	V	C	D	C	G	R	Y	G	C	L	E	T	V	A	S	L	S	A	L	K	K	Q	A	R	V	W	L	K	S	Q	P	V	S	T	Q	L	D	P	E	K	L	T	T	A	Q	L	I	A	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	S	G	A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q	H	L
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														T	T		S		T	T									T	T													S	S								T	T						T	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143																.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		G	E	P	W	I	T	S	W	V	D	R	S	A	N	A	I	G	L	S	L	Y	N	F	L	N	I	L	N	I	N	.	Q	I	W	L	Y	G	R	S	C	A	F	G	E	N	W	L	N	T	I	I	R	Q
Query Conservation																																.
Alig confidence																		.	.													.
Template Conservation																		.	.
Template Sequence		D	I	P	A	V	Y	S	L	V	Q	N	S	F	D	D	F	.	.	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	F	H	Y	R	E	V	L	S	S	V	I	K	K
Template Known Secondary structure		T	S															.	.					T	G	G	G			T	T	S						S						T
Template Predicted Secondary structure																		.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions