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Job DescriptionP76586
Confidence92.07%DateThu Jan 5 12:24:53 GMT 2012
Rank324Aligned Residues256
% Identity14%Templatec1hpmA_
PDB info PDB header:hydrolase (acting on acid anhydrides)Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100......
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Query Sequence  TLCLNVTPTSIECQVANACLSPKG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQS
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SSTT


TTS
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SS
TTTTTT
GGG

GGGTTT

TT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   107..110.........120.........130.... .....140.........150.........160......
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Query Sequence  . . . . . . . . . . . . . . . . . . . EFEYLQIDAPTPQALLSEIEKCWHRHRK. LWPDHTINLALAIHGQVDPVTGVSQTMPQAPW
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Template Sequence  DMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVP. . . . . . . . . . . . . AYFND
Template Known Secondary structure  TT
SSTTTT
TS



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   86...90.........100.........110.........120.........130.........140....... ..150..
 
   167..170.........180.........190.........200..... ....210.........220... ......230.........240..
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Query Sequence  TTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQE. RDFCVINVDYGIGSSFVI. . . NEQIYRGSLYGSGQIGHTI
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Template Sequence  SQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG. . .
Template Known Secondary structure  TT
TTTTS

SS

SS
TTTT
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   153......160.........170.........180.........190.........200.........210.........220.........
 
   243......250.........260.........270.........280.........290.........300..
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Query Sequence  VNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVSTQLDPEKLTTAQLIAAWQSGE. . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . GEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLY
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TT
TTTSS
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   230.........240.........250.........260.........270.........280........
 
   303......310.........320........ .330.........340.........350.........360......
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Query Sequence  . . . . . . . . . . . PWITSWVDRSANAIGLSLYNFLNILN. . . . . INQIWLYGRSCAFGENWLNTIIRQTGFNPFDRDEGPSV
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Template Sequence  EGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRI. PKIQKLLQDFF. . . . . . . . . . . . .
Template Known Secondary structure  TTTT

GGG

SGGGG
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   289290.........300.........310.........320.........330.........340... ......350....
 
   367..370.........380.........
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Query Sequence  KATQIGFGQLSRAQQVLGIGYLY
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Template Sequence  NGKELNKSINPDEAVAYGAAVQA
Template Known Secondary structure  TT


B
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TTT
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   355....360.........370.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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