Return to main results Retrieve Phyre Job Id

Job DescriptionC1P621
Confidence0.71%DateWed Jan 25 15:20:08 GMT 2012
Rank29Aligned Residues12
% Identity42%Templatec3qsqA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:capsid polyprotein; PDBTitle: crystal structure of the projection domain of the human astrovirus2 capsid protein
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.....
Predicted Secondary structure 





Query SS confidence 











Query Sequence  YFYSQAVDESGV
Query Conservation 











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Template Conservation 

 

      
Template Sequence  YFIRGAESGSNV
Template Known Secondary structure 




STT

Template Predicted Secondary structure 






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   555....560......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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