Job Description P0CE49 Confidence 4.36% Date Wed Jan 25 15:20:36 GMT 2012 Rank 62 Aligned Residues 235 % Identity 10% Template c3hosA_ PDB info PDB header:transferase, dna binding protein/dna Chain: A: PDB Molecule:transposable element mariner, complete cds; PDBTitle: crystal structure of the mariner mos1 paired end complex with mg Resolution 3.50 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	G	N	G	R	R	P	Y	P	L	E	T	M	L	R	I	H	C	M	Q	H	W	Y	N	L	S	D	G	A	M	E	D	A	L	Y	E	I	A	S	M	R	L	F	A	R	L	S	L	D	S	A	L	P	D	R	T	T	I	M	N	F	R	H	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	H	G	K	P	P	K	R	Y	E	D	A	E	L	Q	A	L	.	L	D	E	D	D	A	Q	T	Q	K	Q	L	A	E	Q	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	Q	Q	A	V	S	N	R	L	R	E	M	G	K	I	Q	K	V	G	R	W	V	P	H	E	L
Template Known Secondary structure										S	S									.				S	S									T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S												T	T										S
Template Predicted Secondary structure																				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		Q	H	Q	L	A	R	Q	L	F	K	T	I	N	R	W	L	A	.	.	E	A	G	V	M	M	T	Q	G	T	L	V	D	A	T	I	I	E	A	P	S	S	T	K	N	K	E	Q	Q	R	D	P	E	M	H	Q	T	K	K	G	N	Q	W	H	F	G	M	K	A	H	I	G	V	D	A	K	S	G	L	T	H
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		N	E	R	Q	M	E	R	R	K	N	T	C	E	I	L	L	S	R	Y	K	R	K	S	F	L	H	R	I	V	T	G	D	E	K	W	I	F	F	V	N	P	K	R	K	K	S	Y	V	D	P	G	Q	P	A	T	S	T	A	R	P	N	R	F	G	K	K	T	M	L	C	V	W	W	D	Q	S	G	V	I	Y
Template Known Secondary structure																									G	G	G	G											S	B										S	S	S											S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.												.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.												.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.												.	.
Query Sequence		S	L	V	T	T	A	A	N	E	H	D	L	N	Q	L	G	N	L	L	H	.	.	.	.	.	.	.	.	.	.	.	G	E	E	Q	F	V	S	A	D	A	G	.	.	Y	Q	G	A	P	Q	R	E	E	L	A	E	V	D	V	D	W	L	I	A	E	R	P	G	K	V	R	T	L	K	Q	H	P	R	K	N
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.												.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.												.	.																	.												.	.	.	.	.	.	.	.
Template Conservation																																																														.												.	.	.	.	.	.	.	.
Template Sequence		Y	E	L	L	K	P	G	E	T	V	N	A	A	R	Y	Q	Q	Q	L	I	N	L	N	R	A	L	Q	R	K	R	P	E	Y	R	V	I	F	L	H	D	N	A	P	S	H	T	A	R	A	V	R	D	T	L	E	T	L	N	W	E	.	V	L	P	H	A	A	Y	S	P	D	L	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S																								S												S	T	T	S										T	T				.						T	T		T	T	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.												.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		K	T	A	I	N	I	E	Y	M	K	A	S	I	R	A	R	V	E	.	H	P	F	R	I	I	K	R	Q	F	G	F	V	K	A	R	Y	K	G	L	L	K	N	D	N	Q	L	A	M	L	F	T	L	A	N	L	F	R	A	D	Q	M	I	R	Q	W	E	R
Query Conservation																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.					.																																							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	S	D	Y	H	L	F	A	S	M	G	H	A	L	A	E	Q	R	F	D	S	Y	E	S	V	K	K	W	L	D	E	W	F	A	A	K	D	D	E	F	Y	W	.	.	R	G	I	H	K	L	P	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						T									T	T	T		B		S	S															S							.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template SS confidence
																281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions