 |
Job Description | P0CE49 | Confidence | 10.85% | Date | Wed Jan 25 15:20:36 GMT 2012 |
Rank | 27 | Aligned Residues | 65 |
% Identity | 11% | Template | c1bg1A_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:protein (transcription factor stat3b); |
PDBTitle: transcription factor stat3b/dna complex
|
Resolution | 2.25 Å |
|
 |
  |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | W | Q | N | M | V | E | V | I | E | P | F | Y | P | K | A | G | N | G | R | R | P | Y | P | L | E | T | M | L | R | I | H | C | M | Q | H | W | Y | N | L | . |
S | D | G | A | M | E | D | A | L | Y | E | I | A | S | M | R | L | F | A | R | L | S | L | D | S | A | L | P | D | R | T | T | I | M | N | F |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
| . |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |
|   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . |   |
|
|   |
|
Template Sequence |   |
G | T | W | D | Q | V | A | E | V | L | S | W | Q | F | . |
. |
S | S | T | T | K | R | G | L | S | I | E | Q | L | . |
. |
T | T | L | A | E | K | L | L | G | P | G | V | N | Y | S | . |
. |
. |
. |
. |
G | C | Q | I | T | W | A | K | F | C | K | E | N | M | A | G | K | G | F | . |
. |
. |
S | F | W | V | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | S | S |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |
| S |
| S |
|
| T | . | . | . | . | . | T |
|  |  |
|  |  |  |  | T | T | S | B |
| T | T |
| S | S | . | . | . | B |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
499 | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | |
|
. | . | . | . | . | . | . | 520 | . | . | . | . | . | |
|
. | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | |
|
|
560 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|