Job Description P0AEX9 Confidence 99.97% Date Thu Jan 5 11:24:34 GMT 2012 Rank 56 Aligned Residues 276 % Identity 20% Template d1xvxa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.53

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		I	E	E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	V	T	V	E	H	P	D	.	.	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G	G	Y	A	Q	S	G	L	L	A	E	I
Query Conservation																																										.	.
Alig confidence															.	.																										.	.
Template Conservation															.	.
Template Sequence		S	N	D	S	G	I	V	V	Y	N	A	Q	H	.	.	E	N	L	V	K	S	W	V	D	G	F	T	K	D	T	G	I	K	V	T	L	R	N	G	G	D	S	E	L	G	N	Q	L	V	Q	E	G	S	A	S	P	A	D	V	F	L	T	E	N	S	P	A	M	V	L	V	D	N	A	K	L	F	A	P	L
Template Known Secondary structure					S								S		.	.																																					G	G	G				S					S	S	S									T	T		B
Template Predicted Secondary structure															.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		T	P	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	N	P	.	.	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K	A	K	G	K	S	A	L	M	F	N	L	Q	E	P	Y	F	T
Query Conservation																																																.	.
Alig confidence				.	.	.	.	.	.	.																																						.	.											.	.	.	.
Template Conservation				.	.	.	.	.	.	.																																																		.	.	.	.
Template Sequence		D	A	.	.	.	.	.	.	.	V	T	Q	A	Q	V	A	Q	E	Y	R	P	E	H	G	R	W	T	G	I	A	A	R	S	T	V	F	V	Y	N	P	E	K	I	S	E	A	E	L	P	K	S	I	M	D	L	A	K	P	.	.	.	.	E	W	K	G	R	W	A	A	S	P	S	G	A	D	F	Q	A	I
Template Known Secondary structure				.	.	.	.	.	.	.						B		G	G	G	S		S	S	S	S															T	T	T	S		G	G	G	S		S	S	G	G	G	G	G	S	G	.	.	.	.	G	G	T	T	S					T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.																																																		.	.	.	.
Template SS confidence
		80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	L	I	A	A	D	G	G	Y	A	F	K	Y	E	N	G	K	Y	D	I	K	D	V	G	V	D	N	A	G	A	K	A	G	L	T	F	L	V	D	L	I	K	N	K	H	M	N	A	D	T	D	Y	S	I	A	E	A	A	F	N	K	G	E	T	A	M	T	I	N	G	P	W	A	W	S	N	I	D	T
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		V	S	A	M	L	E	L	K	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	L	E	W	L	K	A	M	K	T	N	F	T	A	Y	K	G	.	.	N	S	T	V	M	K	A	V	N	A	G	Q	I	D	G	G	V	I	Y	H	Y	Y	R	F	V	D	Q	A
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	S	S	.	.										T	T	S	S	S						T								T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.																						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		264	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																																																											.
Query SS confidence					.																																																											.
Query Sequence		S	K	V	.	N	Y	G	V	T	V	L	P	T	F	K	G	Q	P	S	K	P	F	V	G	V	L	S	A	G	I	N	A	A	S	P	N	K	E	L	A	K	E	F	L	E	N	Y	L	L	T	D	E	G	L	E	A	V	N	K	D	K	P	.	L	G	A	V	A	L	K	S	Y	E	E	E	L	A	K
Query Conservation					.																																																											.
Alig confidence					.																																																											.
Template Conservation
Template Sequence		K	T	G	E	N	S	G	K	T	Q	L	H	Y	F	K	H	Q	D	P	G	A	F	V	S	I	S	G	G	G	V	L	A	S	S	K	H	P	K	E	A	Q	E	F	V	K	W	I	T	G	K	S	G	Q	D	I	L	R	T	N	N	A	F	E	Y	A	V	G	V	D	A	A	S	N	P	K	L	V	P
Template Known Secondary structure		T	T		T	T	T	T	T								T	T		G	G	G										B	T	T		S	S													S										S	S	S			B			B	T	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions