Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX9
Confidence99.97%DateThu Jan 5 11:24:34 GMT 2012
Rank59Aligned Residues274
% Identity16%Templated1xc1a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.51

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60....... ..70.........80.........90.........100.........
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Query Sequence  KLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPD. . KLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDK
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Template Sequence  DITVYNGQH. . KEAAQAVADAFTRATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPA. .
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   1........ 10.........20.........30.........40.........50.........60.........70......
 
   110.........120.........130.........140.........150. ........160.........170.........180.......
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Query Sequence  AFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNP. . PKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLI
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Template Sequence  . . . STINETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNY. . . . . . ATPKWKNRIGYVPTSGAFLEQIV
Template Known Secondary structure  ...T

TTS


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GGGS
SSGGGG......SSGGGTTT
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   77..80.........90.........100.........110.........120.... .....130.........140.......
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  AADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVN
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Template Sequence  AIVKL. . . . . . . . . . . . . . . . . . . KGEAAALKWLKGLKEYGKPYAK. . NSVALQAVENGEIDAALINNYYWHAFAREKGV
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S
SS..TTSSS
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   148.150.. .......160.........170.... .....180.........190.........200......
 
   268.270......... 280.........290.........300.........310.........320.........330.........
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Query Sequence  YGVTVLPTFKGQ. PSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAK
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Template Sequence  QNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEGQRALTAVRAEYPLNPHVVSTFNLEP
Template Known Secondary structure  GG




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   207..210.........220.........230.........240.........250.........260.........270.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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