Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEX9
Confidence100.00%DateThu Jan 5 11:24:34 GMT 2012
Rank4Aligned Residues369
% Identity97%Templatec3ob4A_
PDB info PDB header:allergenChain: A: PDB Molecule:maltose abc transporter periplasmic protein, arah 2; PDBTitle: mbp-fusion protein of the major peanut allergen ara h 2
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT
Query Conservation        
                   


   
 
           
      
  


              
      
Alig confidence 















































































Template Conservation 
 
 
 
 

         
    
 


  



 
   
    

  
  

  


              
 
 

 
Template Sequence  KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT
Template Known Secondary structure 


SSS

TTS





TTTTT
S
SGGGTT



Template Predicted Secondary structure 



























Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL
Query Conservation                            
                  
 
 

       
                     
Alig confidence 















































































Template Conservation        
 
          


 



       
 





   
 




   
  

  
                 
Template Sequence  PAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL
Template Known Secondary structure 

B
TTT
S

TTT
SS

SBGGGTT




SS
Template Predicted Secondary structure 

















Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   187..190.........200.........210.........220.........230.........240.........250.........260......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV
Query Conservation                                

     
   
              
  
  
                 
Alig confidence 















































































Template Conservation      
           
     
 

    

    

   
              
  

 

 
 
 
          
Template Sequence  IAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAV
Template Known Secondary structure  TT

SSSSSSTTSS
TT

TT

GGGTSS
Template Predicted Secondary structure 
































Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230.........240
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT
Query Conservation                           
   
   
 
  

                   
                    
Alig confidence 















































































Template Conservation    

   
   
       
     
 
 
 




  


  
 
 
                         

     
Template Sequence  NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT
Template Known Secondary structure 



TT


TT
S
TTTSS

SSBTTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   241........250.........260.........270.........280.........290.........300.........310.........320
 
   347..350.........360.........370.........380.........390.....
Predicted Secondary structure 











Query SS confidence 
















































Query Sequence  MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRIT
Query Conservation            
                     
      

      
 
Alig confidence 
















































Template Conservation        
   
  
    
   
  

  
  
  
 
 

  


 
 
Template Sequence  MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAA
Template Known Secondary structure  S


STTSS
T
Template Predicted Secondary structure 














Template SS confidence 
















































   321........330.........340.........350.........360.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions