Job Description P0AEX9 Confidence 99.33% Date Thu Jan 5 11:24:34 GMT 2012 Rank 73 Aligned Residues 230 % Identity 17% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	V	T	V	E	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G	G	Y	A	Q	S	G	L	L	A	E	I	T	P	D	K	A	F
Query Conservation
Alig confidence											.																														.	.										.	.																												.
Template Conservation											.																														.	.										.	.																												.
Template Sequence		D	V	N	L	Y	G	P	G	G	.	P	H	T	A	L	K	D	I	A	N	K	Y	S	E	K	T	G	V	K	V	N	V	N	F	G	P	Q	A	T	.	.	W	F	E	K	A	K	K	D	A	.	.	D	I	L	F	G	A	S	D	Q	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V	S	K	I	.
Template Known Secondary structure									T	T	.	T																								S		G	G	G	.	.	T									.	.	S					S	S										T	T	G	G	G	S		G	G	G		.
Template Predicted Secondary structure											.																														.	.										.	.																												.
Template SS confidence
		21	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	N	P	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K	A	K	G	K	S	A	L	M	F	N	L	Q	E	P	Y	F	T	W	P	L	I	A	A	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	L	Y	F	R	E	A	I	I	L	T	Q	K	G	N	.	P	L	K	I	K	G	L	K	D	L	A	.	.	.	.	.	.	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	T	T		.	T	T				S						.	.	.	.	.	.		S										T	T	S	S			T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.												.	.	.	.	.	.
Template SS confidence
																						95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	A	F	K	Y	E	N	G	K	Y	D	I	K	D	V	G	V	D	N	A	G	A	K	A	G	L	T	F	L	V	D	L	I	K	N	K	H	M	N	A	D	T	D	Y	S	I	A	E	A	A	F	N	K	G	E	T	A	M	T	I	N	G	P	W	A	W	S	N	I	D	T	S	K	V	N	Y	G	V	T
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template Sequence		I	G	R	T	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	T	I	Q	N	F	R	N	N	I	V	A	F	V	P	N	S	G	S	A	R	K	L	F	A	Q	D	Q	A	D	A	W	I	T	W	I	D	W	S	K	S	N	P	D	I	G	T	A	V	.	.	.
Template Known Secondary structure			G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T						S	S										T	T			S													T	T	S					.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.
Template SS confidence
		148	.	150	.	.	.																						.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	T	F	K	G	Q	P	S	K	P	F	V	G	V	L	S	A	G	I	N	A	A	S	P	N	K	E	L	A	K	E	F	L	E	N	Y	L	L	T	D	E	G	L	E	A	V	N	K	D	K	P	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	A	I	E	K	D	L	V	V	Y	R	T	F	N	V	I	A	K	E	G	A	S	K	E	T	Q	D	F	I	A	Y	L	S	.	S	K	E	A	K	E	I	F	K	K	Y	G	W	R	E
Template Known Secondary structure		.	.	.	.	.	.	.				T	T	T												T	T												T	T	.	S										T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.																																	.
Template SS confidence
									204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions