Job Description P0AEX9 Confidence 99.92% Date Thu Jan 5 11:24:34 GMT 2012 Rank 67 Aligned Residues 284 % Identity 15% Template c3cg1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:upf0100 protein pf0080; PDBTitle: crystal structure of p. furiosus periplasmic binding protein2 moda/wtpa with bound tungstate Resolution 1.60 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																														.	.	.	.								.																									.
Query SS confidence																														.	.	.	.								.																									.
Query Sequence		E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	.	.	.	.	G	I	K	V	T	V	E	.	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	.	A	H	D	R	F	G	G	Y	A	Q	S	G	L	L	A
Query Conservation																														.	.	.	.								.																									.
Alig confidence											.																			.	.	.	.								.																									.
Template Conservation											.
Template Sequence		E	V	T	L	I	V	F	H	A	.	G	S	L	S	V	P	F	Q	E	V	E	K	E	F	S	E	Y	A	E	R	N	L	G	I	K	V	S	F	Q	D	E	A	S	G	S	V	M	A	V	R	K	V	T	D	L	G	R	K	A	D	V	I	G	V	A	D	Y	T	L	I	P	Q	L	L	I	P	N	Y	T	D
Template Known Secondary structure											.	G	G	G																				S																					T	S					S					S	S	T	T						T	T	T	T	T		S
Template Predicted Secondary structure											.
Template SS confidence
		32	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	T	P	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	N	P	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K	A	K	G	K	S	A	L	M	F	N	L	Q	E	P	Y	F	T
Query Conservation
Alig confidence							.	.																																																															.	.	.	.	.
Template Conservation							.	.																																																															.	.	.	.	.
Template Sequence		F	Y	V	L	F	.	.	A	T	N	E	I	V	I	A	F	T	D	K	S	R	Y	V	E	E	M	K	S	N	P	D	K	W	Y	E	I	L	A	R	E	D	V	R	F	G	F	S	D	P	N	Q	D	P	C	G	Y	R	S	L	M	V	I	K	L	A	D	L	Y	Y	.	.	.	.	.	G	K	E	I	F	K
Template Known Secondary structure							.	.											T	T	S	T	T								G	G	G						T	S	T	T								T	T	T																			.	.	.	.	.	T	S
Template Predicted Secondary structure							.	.																																																															.	.	.	.	.
Template SS confidence
		111	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	L	I	A	A	D	G	G	Y	A	F	K	Y	E	N	G	K	Y	D	I	K	D	V	G	V	D	N	A	G	A	K	A	G	L	T	F	L	V	D	L	I	K	N	K	H	M	N	A	D	T	D	Y	S	I	A	E	A	A	F	N	K	G	E	T	A	M	T	I	N	G	P	W	A	W	S	N	I	D	T
Query Conservation
Alig confidence																																																									.	.
Template Conservation																																																									.	.
Template Sequence		E	L	I	E	E	N	T	N	I	Y	S	N	G	T	Q	I	Y	A	P	K	E	I	T	V	N	P	G	K	I	V	I	R	P	K	E	T	D	L	L	G	L	V	E	S	G	S	I	D	Y	I	F	I	Y	K	S	.	.	V	A	K	Q	H	N	L	S	Y	I	T	L	P	S	E	I	N	L	G	D	F	S	K
Template Known Secondary structure				T	T	T	T	B	S					T	T						S	S			B		T	T	T					S	S	G	G	G	G							T	S	S	S								.	.					T	T								T	T	T	S	S			G	G	G
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	V	N	Y	G	V	T	V	L	P	T	F	K	G	Q	P	S	K	P	F	V	G	V	L	S	A	G	I	N	A	A	S	P	N	K	E	L	A	K	E	F	L	E	N	Y	L	L	T	D	E	G	L	E	A	V	N	K	D	K	P
Query Conservation
Alig confidence																																																	.
Template Conservation																																																	.
Template Sequence		E	K	F	Y	G	Q	I	S	I	T	L	G	S	T	G	K	T	I	K	A	K	P	I	V	Y	G	V	T	V	L	K	D	A	P	N	R	E	V	A	I	E	F	L	R	Y	L	L	.	S	E	N	G	K	R	I	F	E	K	N	H	Q
Template Known Secondary structure						T	T						T	T	T																	T	T		T	T													.	S										T	T
Template Predicted Secondary structure																																																	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions