Job Description P0AEX9 Confidence 100.00% Date Thu Jan 5 11:24:34 GMT 2012 Rank 52 Aligned Residues 281 % Identity 14% Template c3c9hB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, substrate binding protein; PDBTitle: crystal structure of the substrate binding protein of the abc2 transporter from agrobacterium tumefaciens Resolution 1.90 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																			.													.	.																						.	.
Query SS confidence																																			.													.	.																						.	.
Query Sequence		S	A	L	A	K	I	E	E	G	K	L	V	I	W	I	N	G	D	K	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	.	D	T	G	I	K	V	T	V	E	H	P	D	.	.	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	.	.	A	H	D	R	F	G	G	Y	A
Query Conservation																																			.													.	.																						.	.
Alig confidence																				.	.														.													.	.																						.	.
Template Conservation																				.	.
Template Sequence		A	L	S	G	K	T	D	A	Q	T	L	V	V	Y	S	S	L	D	.	.	E	P	L	A	T	P	M	I	E	G	F	Q	K	A	N	P	D	I	A	V	H	Y	E	D	M	L	T	G	E	I	Y	D	R	I	V	K	E	T	D	A	G	K	K	T	A	D	F	A	F	S	S	A	M	D	L	Q	V	K	L	S
Template Known Secondary structure			T	T			T	T										S		.	.																T	T																							T	T			B		S					S
Template Predicted Secondary structure																				.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		Q	S	G	L	L	A	E	I	T	P	D	K	A	F	Q	D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	.	.	N	P	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K	A	K	G	K	S	A	L	M	F
Query Conservation																																																						.	.
Alig confidence												.	.	.	.	.	.																						.	.														.	.
Template Conservation												.	.	.	.	.	.																						.	.
Template Sequence		N	D	G	Y	A	Q	R	S	D	L	.	.	.	.	.	.	A	M	S	A	R	W	P	A	W	A	N	W	R	N	T	A	Y	A	L	T	F	.	.	E	P	A	V	F	V	Y	H	K	P	S	F	T	T	E	K	P	P	A	T	R	A	E	F	V	D	Y	L	E	R	H	A	K	E	V	H	G	R	I	A	T
Template Known Secondary structure			T	T	S							.	.	.	.	.	.	T	T	G	G	G	S		G	G	G			T	T	T					B		.	.									G	G	G		S	S	S					S											T					T	T
Template Predicted Secondary structure												.	.	.	.	.	.																						.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	Q	E	P	Y	F	T	W	P	L	I	A	A	D	G	G	Y	A	F	K	Y	E	N	G	K	Y	D	I	K	D	V	G	V	D	N	A	G	A	K	A	G	L	T	F	L	V	D	L	I	K	N	K	H	M	N	A	D	T	D	Y	S	I	A	E	A	A	F	N	K	G	E	T	A	M	T	I	N	G	P
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		Y	D	I	E	R	S	G	V	G	F	L	F	M	S	R	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	F	G	D	I	W	S	V	I	K	A	M	G	A	A	G	V	K	V	Y	S	.	T	S	S	A	I	L	E	R	V	S	D	G	R	F	V	L	G	Y	N	I	L
Template Known Secondary structure				T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T											T	T					S	.											T	T	S		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	W	S	N	I	D	T	S	K	V	N	Y	G	V	T	V	L	P	T	F	K	G	Q	P	S	K	P	F	V	G	V	L	S	A	G	I	N	A	A	S	P	N	K	E	L	A	K	E	F	L	E	N	Y	L	L	T	D	E	G	L	E	A	V	N	K	D	K	P	L	G	A	V	A	L	K	S	Y	E	E
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		G	S	Y	A	A	D	W	A	S	R	H	P	D	V	G	I	V	L	P	K	D	Y	.	.	.	.	.	T	V	V	M	S	R	I	G	L	V	P	E	A	A	A	N	P	E	L	G	R	R	Y	L	E	F	F	M	S	K	E	G	Q	T	I	M	A	R	Q	L	Q	I	P	A	V	S	P	E	V	A	G	E	N
Template Known Secondary structure										T	T		T	T							S	S		.	.	.	.	.												T	T	B	S	S													S											S				B			T	T			S	S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		336	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	N
Template Known Secondary structure		B
Template Predicted Secondary structure
Template SS confidence
		311	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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