Job Description P0AEX9 Confidence 21.90% Date Thu Jan 5 11:24:34 GMT 2012 Rank 102 Aligned Residues 141 % Identity 18% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

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		34	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		V	I	W	I	N	G	D	K	.	G	Y	N	G	L	A	E	V	G	K	K	F	E	K	D	T	G	I	K	V	T	V	E	H	P	D	K	L	E	E	K	F	P	Q	V	A	A	T	G	D	G	P	D	I	I	F	W	A	H	D	R	F	G	G	Y	A	Q	S	G	L	L	A	E	I	T	P	D	K	A	F	Q
Query Conservation										.
Alig confidence										.																																							.												.
Template Conservation																																																	.												.
Template Sequence		V	I	W	T	V	S	V	T	R	L	F	E	L	F	R	D	I	S	L	E	F	D	H	L	A	N	I	T	P	I	Q	L	G	F	E	K	A	V	T	Y	I	R	K	K	L	A	N	.	E	R	C	D	A	I	I	A	A	G	S	.	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G
Template Known Secondary structure								S	S	T										T	T	T	T	T	T	S																					T	T	.				S								.							T	T		S	S
Template Predicted Secondary structure																																																	.												.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		D	K	L	Y	P	F	T	W	D	A	V	R	Y	N	G	K	L	I	A	Y	P	I	A	V	E	A	L	S	L	I	Y	N	K	D	L	L	P	.	.	.	.	.	N	P	P	K	T	W	E	E	I	P	A	L	D	K	E	L	K	A	K	G	K	S	A	L	M	F	N
Query Conservation																																							.	.	.	.	.
Alig confidence																																							.	.	.	.	.
Template Conservation
Template Sequence		Y	D	V	L	Q	F	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R	L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	A	V	V	G	A
Template Known Secondary structure											T	T		T	T	S								S	S													T									S	S														T	T							S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions