 |
Job Description | P37669 | Confidence | 2.32% | Date | Thu Jan 5 11:56:41 GMT 2012 |
Rank | 42 | Aligned Residues | 88 |
% Identity | 13% | Template | d3cx5c1 |
SCOP info | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
| a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
|
Resolution | 1.90 |
|
 |
  |   |
207 | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | A | L | F | A | T | G | V | F | I | I | S | R | G | T | L | Y | E | L | Q | W | R | G | N | F | A | D | T | W | Y | L | Y | C | G | P | M | V | F | I | C | A | I | A | L | L | T | L | V | K | N | T | L | D | T | R | T | I | R | G | L | G | L | I | S | R | H | S | L | G | I | Y | G | F | H | A | L | I | I | H |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |
|
|   |   |
|
|
|   |   |
Template Sequence |   |
K | L | L | G | V | I | T | M | F | A | A | I | L | V | L | L | V | L | P | F | T | D | R | S | V | V | R | G | N | T | F | K | V | L | S | K | F | F | F | F | I | F | V | F | N | F | V | L | L | G | Q | I | G | A | C | H | V | E | V | P | Y | V | L | M | G | Q | I | A | T | F | I | Y | F | A | Y | F | L | I | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G |  |  |  |  |
|
|
| S | S | S | S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
| S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
288 | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . |
  |
  |   |
287 | . | . | 290 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | R | T | R | G | I | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |
Template Sequence |   |
P | V | I | S | T | I | E | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
368 | . | 370 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|