Job Description P0AE34 Confidence 99.96% Date Thu Jan 5 11:22:25 GMT 2012 Rank 7 Aligned Residues 219 % Identity 15% Template c3fh6F_ PDB info PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli Resolution 4.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	S	A	A	G	M	T	V	G	L	A	V	C	A	L	I	V	G	L	A	L	A	M	F	F	A	V	W	E	S	A	K	W	R	P	V	A	W	A	G	S	A	L	V	T	I	L	R	G	L	P	E	I	L	V	V	L	F	I	Y	F	G	S	S	Q	L	L	L	T	L	S	D	G	F	T	I	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	L	A	I	F	V	W	T	V	V	F	S	L	I	T	V	F	L	T	V	A	V	G	M	V	L	A	C	L	V	Q	W	E	A	L	R	G	K	A	V	Y	R	V	L	L	I	L	P	Y	A	V	P	S	F	I	S	I	L	I	F	K	G	L	F	N	Q	S	F	G	E	I	N	M	M	L	S	A	L	F
Template Known Secondary structure																																	T		S	S	S	S															S		S											S		S	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	V	Q	I	P	V	Q	M	D	I	E	N	F	D	V	S	P	F	L	C	G	V	I	A	L	S	L	L	Y	A	A	Y	A	S	Q	T	L	R	G	A	L	K	A	V	P	V	G	Q	W	E	S	G	Q	A	L	G	L	S	K	S	A	I	F	F	R	L	V	M	P	Q	M	W	R	H	A	L	P	G	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	V	K	P	A	W	F	S	D	P	T	T	A	R	T	M	L	I	I	V	N	T	W	L	G	Y	P	Y	M	M	I	L	C	M	G	L	L	K	A	I	P	D	D	L	Y	E	A	S	A	M	D	G	A	G	P	F	Q	N	F	F	K	I	T	L	P	L	L	I	K	P	L	T	P	L	M
Template Known Secondary structure		.	.	.	.	.	S					S	S	S	S																															S															S							T	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.													.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		G	N	Q	W	L	V	L	L	K	D	T	A	L	V	S	L	I	S	V	N	D	L	.	.	.	.	.	.	.	.	.	.	.	.	M	L	Q	T	K	S	I	A	T	R	T	Q	E	.	.	.	.	.	P	F	T	W	Y	I	V	A	A	A	I	Y	L	V	I	T	L	L	S	Q	Y	I	L	K	R	I	D	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		I	A	S	F	A	F	N	F	N	N	F	V	L	I	Q	L	L	T	N	G	G	P	D	R	L	G	T	T	T	P	A	G	Y	T	D	L	L	V	N	Y	T	Y	R	I	A	F	E	G	G	G	G	Q	D	F	G	L	A	A	A	I	A	T	L	I	F	L	L	V	G	A	L	A	I	V	N	L	K	A	T	R
Template Known Secondary structure										T										S	S		S			S	S		S	S	S			S	S										T	T		S	S	S	S		S	S																										S	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		229
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		511

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions