Return to main results Retrieve Phyre Job Id

Job DescriptionP31060
Confidence97.26%DateThu Jan 5 11:46:56 GMT 2012
Rank152Aligned Residues152
% Identity17%Templatec3ldaA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .........60.........70.........80.........90.........
Predicted Secondary structure 









......



















Query SS confidence 
























. . . . . .
















































Query Sequence  LNAGDSWAFVGSNGSGKSALARALA. . . . . . GELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTG
Query Conservation 
  

   


 








  
 ......
      
 
   
                                   
Alig confidence 
























......



























..........










Template Conservation 
  
 
  
 
 

 


 
 
 

   
   
         

  
      

    ..........           
Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIA. . . . . . . . . . QRFGLDPDDAL
Template Known Secondary structure  TTSSTTSSTTS
GGGT

SSSSS


..........TT

Template Predicted Secondary structure 

























..........



Template SS confidence 















































































   175....180.........190.........200.........210.........220.........230... ......240....
 
   100.........110.........120.........130.........140.........150.........160.........170. ..
Predicted Secondary structure 

























......
Query SS confidence 







































































. . . . . .

Query Sequence  RTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASR. . . . . . QQ
Query Conservation                      
    
          




 


 

 

   
 







  

    ......  
Alig confidence 






















.........................























......

Template Conservation    
                    .........................        






  
       
   
  
Template Sequence  NNVAYARAYNADHQLRLLDAAAQ. . . . . . . . . . . . . . . . . . . . . . . . . MMSESRFSLIVVDSVMALYRGELSARQMHLAK
Template Known Secondary structure  T

S.........................S
TGGGG



Template Predicted Secondary structure 








.........................








Template SS confidence 















































































   245....250.........260....... ..270.........280.........290.........
 
   174.....180.........190.........200.........210..
Predicted Secondary structure 











Query SS confidence 






































Query Sequence  LAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCT
Query Conservation 
   
  
   
 


 


    
    
 
 

  
 
Alig confidence 






































Template Conservation 
   

 

    
 

  

          

 
    
Template Sequence  FMRALQRLADQFGVAVVVTNQVNIMAYSSTTRLGFKKGK
Template Known Secondary structure 




S
S
Template Predicted Secondary structure 







Template SS confidence 






































   306...310.........320.........330.........340....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions