Job Description P31060 Confidence 97.06% Date Thu Jan 5 11:46:56 GMT 2012 Rank 173 Aligned Residues 146 % Identity 20% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	G	D	S	W	A	F	V	G	S	N	G	S	G	K	S	A	L	A	R	A	L	A	G	E	L	P	L	L	K	G	E	R	Q	S	Q	F	S	H	I	T	R	L	S	F	E	Q	L	Q	K	L	V	S	D	E	W	Q	R	N	N	T	D	M	L	G	P	G	E	D	D	T	G	R	T	T	A	E	I
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	M	G	G	V	A	A	F	I	D	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T								S	T	T	S	S															T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	Q	D	E	V	K	D	A	P	R	C	M	Q	L	A	Q	Q	F	G	I	T	A	L	L	D	R	R	F	K	Y	L	S	T	G	E	T	R	K	T	L	L	C	Q	A	L	M	S	E	P	D	L	L	I	L	D	E	P	F	D	G	L	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																	.
Template Sequence		.	.	.	.	.	.	.	H	A	L	D	P	V	Y	A	K	N	L	G	V	D	L	K	S	L	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L	V	R	S	G	V	V	D	L	I	V	V	D	.	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q	V	G	L	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.												T			G	G	G							S	S														T	S			S						.		T	T	T								T	T				S	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																	.
Template SS confidence
									99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
				170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	S	R	Q	Q	L	A	E	R	L	A	S	L	H	Q	S	G	I	T	L	V	L	V	L	N	R	F	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	E	F	V	Q	F	A	G	V	L	A	D	C	T	L	A	E	T	G	A
Query Conservation		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V	V	I	F	T	N	Q	I	R	M	K	I	G	V	M	F	G	S	P	E	T	T	T	G	G	L	A	L	K	F	Y	A	T	M	R	M	E	V	R	R	G	E	P	I	K	E	G	K
Template Known Secondary structure																	T	S	S									S	S	S		S	S	S	S	S		S		S	S		T										S														T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions