Job Description P31060 Confidence 100.00% Date Thu Jan 5 11:46:56 GMT 2012 Rank 3 Aligned Residues 445 % Identity 20% Template c3bk7A_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii Resolution 2.80 Å

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		4	.	.	.	.	.									10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.						.																																																						.
Query SS confidence								.	.	.	.	.	.	.	.						.																																																						.
Query Sequence		L	Q	I	L	Q	G	.	.	.	.	.	.	.	.	T	F	R	L	S	.	D	T	K	T	L	Q	L	P	Q	L	T	L	N	A	G	D	S	W	A	F	V	G	S	N	G	S	G	K	S	A	L	A	R	A	L	A	G	E	L	P	L	L	K	G	E	R	Q	S	Q	F	S	H	I	.	T	R	L	S	F	E
Query Conservation								.	.	.	.	.	.	.	.						.																																																						.
Alig confidence								.	.	.	.	.	.	.	.						.											.																																											.
Template Conservation																																.
Template Sequence		I	S	I	V	N	L	P	E	Q	L	D	E	D	C	V	H	R	Y	G	V	N	A	F	V	L	Y	R	L	P	I	.	V	K	D	G	M	V	V	G	I	V	G	P	N	G	T	G	K	T	T	A	V	K	I	L	A	G	Q	L	I	P	N	L	C	E	D	N	D	S	W	D	N	V	I	R	A	F	R	G	N
Template Known Secondary structure									T	T	G	G	G	S						S	T	T										.			T	T	S								T	T	S	S									T	T	S	S				T	T	T	T											T	T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		Q	L	Q	K	L	V	S	D	E	W	Q	R	N	N	T	D	M	L	G	P	G	E	D	D	T	G	R	T	T	A	E	I	I	Q	D	E	V	K	D	A	.	.	.	.	P	R	C	M	Q	L	A	Q	Q	F	G	I	T	A	L	L	D	R	R	F	K	Y	L	S	T	G	E	T	R	K	T	L	L	C	Q	A
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.
Template Conservation
Template Sequence		E	L	Q	N	Y	F	E	R	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	L	P	K	A	V	K	G	K	V	R	E	L	L	K	K	V	D	E	V	G	K	F	E	E	V	V	K	E	L	E	L	E	N	V	L	D	R	E	L	H	Q	L	S	G	G	E	L	Q	R	V	A	I	A	A	A
Template Known Secondary structure		T											T	S								S		G	G	G	G	G	G	T			S	B								T			S	S									T	T		T	T	G	G	G	S	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	S	E	P	D	L	L	I	L	D	E	P	F	D	G	L	D	V	A	S	R	Q	Q	L	A	E	R	L	A	S	L	H	Q	S	G	I	T	L	V	L	V	L	N	R	F	D	E	I	P	E	F	V	Q	F	A	G	V	L	A	D	C	T	L	A	E	T	G	A	K	E	E	L	L	Q	Q	A	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	R	K	A	H	F	Y	F	F	D	E	P	S	S	Y	L	D	I	R	Q	R	L	K	V	A	R	V	I	R	R	L	A	N	E	G	K	A	V	L	V	V	E	H	D	L	A	V	L	D	Y	L	S	D	V	I	H	V	V	Y	G	E	P	G	V	Y	G	I	F	S	K	P	K	G	T	R	N	G	I	N
Template Known Secondary structure				S			S							T	T	T	T																			T	T								S										S							S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		Q	L	.	.	.	.	A	H	S	E	Q	L	E	G	V	Q	L	P	E	P	D	E	P	S	A	R	H	A	L	P	A	N	E	P	R	I	V	L	N	N	G	V	V	S	Y	N	D	R	P	I	L	N	N	L	S	W	Q	V	N	P	G	E	H	W	Q	I	V	G	P	N	G	A	G	K	S	T	L	L	S	L
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.																																												.
Template Conservation																																																			.
Template Sequence		E	F	L	Q	G	Y	L	K	D	E	N	V	R	F	R	P	Y	E	I	R	F	T	K	L	S	E	R	V	D	V	E	R	E	T	L	V	E	Y	P	R	L	V	K	D	Y	G	S	F	K	.	L	E	V	E	P	G	E	I	R	K	G	E	V	I	G	I	V	G	P	N	G	I	G	K	T	T	F	V	K	M
Template Known Secondary structure						T			T	T	T	T					S	S							S	T	T	S																			S	S			.										T	T									T	T	S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	G	D	H	P	Q	G	Y	S	N	D	L	T	L	F	G	R	R	R	G	S	G	E	T	I	W	D	I	K	K	H	I	G	Y	V	S	S	S	L	H	L	D	Y	R	V	S	T	T	V	R	N	V	I	L	S	G	Y	F	D	S	I	G	I	Y	Q	A	V	S	D	R	Q	Q	K	L	V	Q	Q	W	L
Query Conservation
Alig confidence							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																			.	.	.	.	.	.	.	.
Template Conservation							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																			.	.	.	.	.	.	.	.
Template Sequence		L	A	G	V	E	.	E	P	T	E	G	K	V	E	W	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	Y	K	P	Q	Y	I	K	A	.	.	E	Y	E	G	T	V	Y	E	L	L	S	K	I	D	S	S	K	L	.	.	.	.	.	.	.	.	N	S	N	F	Y	K	T	E	L	L
Template Known Secondary structure				T	S	S	.			S	B	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S				.	.			S	S	B														.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure							.												.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.															.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.									.	.	.	.	.	.	.	440	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	L	G	I	D	K	R	T	A	D	A	P	F	H	S	L	S	W	G	Q	Q	R	L	A	L	I	V	R	A	L	V	K	H	P	T	L	L	I	L	D	E	P	L	Q	G	L	D	P	L	N	R	Q	L	I	R	R	F	V	D	V	L	I	S	E	G	E	T	Q	L	L	F	V	S	H	H	A	E	D	A
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		K	P	L	G	I	.	I	D	L	Y	D	R	N	V	E	D	L	S	G	G	E	L	Q	R	V	A	I	A	A	T	L	L	R	D	A	D	I	Y	L	L	D	E	P	S	A	Y	L	D	V	E	Q	R	L	A	V	S	R	A	I	R	H	L	M	E	K	N	E	K	T	A	L	V	V	E	H	D	V	L	M	I
Template Known Secondary structure					T		.	T	T	T	T	T	S	B	G	G	G																T	S			S							T	T	T	T																				T	T								S
Template Predicted Secondary structure							.
Template SS confidence
		443	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
		466	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	C	I	T	H	R	L	E	F	V	P
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		D	Y	.	V	S	D	R	L	I	V	F	E
Template Known Secondary structure				.			S
Template Predicted Secondary structure				.
Template SS confidence
		522	.		.	.	.	.	.	.	530	.	.