Job Description P31060 Confidence 100.00% Date Thu Jan 5 11:46:56 GMT 2012 Rank 43 Aligned Residues 214 % Identity 23% Template c2yl4A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 10, PDBTitle: structure of the human mitochondrial abc transporter, abcb10 Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		S	S	L	Q	I	L	Q	G	T	F	R	L	S	.	.	.	D	T	K	T	L	Q	L	P	Q	L	T	L	N	A	G	D	S	W	A	F	V	G	S	N	G	S	G	K	S	A	L	A	R	A	L	A	G	E	L	P	L	L	K	G	E	R	Q	S	Q	F	S	H	I	T	R	L	S	F	E	Q	L	Q	K	L
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		G	A	L	E	F	K	N	V	H	F	A	Y	P	A	R	P	E	V	P	I	F	Q	D	F	S	L	S	I	P	S	G	S	V	T	A	L	V	G	P	S	G	S	G	K	S	T	V	L	S	L	L	L	R	L	Y	D	P	A	S	G	T	I	S	L	D	G	H	D	I	R	Q	L	N	P	V	W	L	R	S	K
Template Known Secondary structure														S	S		T	T	S												T	T									T	T	S	S	S	T							T	T	S	S			S							T	T			T	T	T	B								S
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	D	E	W	Q	R	N	N	T	D	M	L	G	P	G	E	D	D	T	G	R	T	T	A	E	I	I	Q	D	E	V	K	D	A	P	R	C	M	Q	L	A	Q	Q	F	G	I	T	A	L	L	D	R	R	F	K	.	.	.	.	.	.	.	.	.	.	.	Y	L	S	T	G	E	T	R	K	T	L	L	C
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		I	G	T	V	S	Q	E	P	I	L	F	S	C	S	I	A	E	N	I	.	.	.	.	A	Y	G	A	D	D	P	S	S	V	T	A	E	E	I	Q	R	V	A	E	V	A	N	A	V	A	F	I	R	N	F	P	Q	G	F	N	T	V	V	G	E	K	G	V	L	L	S	G	G	Q	K	Q	R	I	A	I	A
Template Known Secondary structure							S	S					S	S	B						.	.	.	.		T	T	S	S	S	T	T	T	S												T	T							T	S	S	S	G	G	G		B		S	S	S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.					.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	M	S	E	P	D	L	L	I	L	D	E	P	F	D	G	L	D	V	A	S	R	Q	Q	L	A	E	R	L	A	S	L	H	Q	S	G	I	T	L	V	L	V	L	N	R	F	D	E	I	P	E	F	V	Q	F	A	G	V	L	A	D	C	T	L	A	E	T	G	A	K	E	E
Query Conservation
Alig confidence																																						.																	.
Template Conservation																																						.																	.
Template Sequence		R	A	L	L	K	N	P	K	I	L	L	L	D	E	A	T	S	A	L	D	A	E	N	E	Y	L	V	Q	E	A	L	D	R	L	M	D	.	G	R	T	V	L	V	I	A	H	R	L	S	T	I	K	N	.	A	N	M	V	A	V	L	D	Q	G	K	I	T	E	Y	G	K	H	E	E
Template Known Secondary structure									S									S	S																		T	.	T	S															.	S	S							T	T								S
Template Predicted Secondary structure																																						.																	.
Template SS confidence
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.		.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.		.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions