Job Description P31060 Confidence 100.00% Date Thu Jan 5 11:46:56 GMT 2012 Rank 8 Aligned Residues 359 % Identity 23% Template c2ygrD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:uvrabc system protein a; PDBTitle: mycobacterium tuberculosis uvra Resolution 3.40 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																					.																												.	.
Query SS confidence																					.																												.	.
Query Sequence		V	K	D	A	P	R	C	M	Q	L	A	Q	Q	F	G	I	T	A	L	.	L	D	R	R	F	K	Y	L	S	T	G	E	T	R	K	T	L	L	C	Q	A	L	M	S	E	P	D	.	.	L	L	I	L	D	E	P	F	D	G	L	D	V	A	S	R	Q	Q	L	A	E	R	L	A	S	L	H	Q	S	G	I
Query Conservation																					.																												.	.
Alig confidence																					.																												.	.
Template Conservation
Template Sequence		L	K	E	I	R	S	R	L	G	F	L	L	D	V	G	L	E	Y	L	S	L	S	R	A	A	A	T	L	S	G	G	E	A	Q	R	I	R	L	A	T	Q	I	G	S	G	L	V	G	V	L	Y	V	L	D	E	P	S	I	G	L	H	Q	R	D	N	R	R	L	I	E	T	L	T	R	L	R	D	L	G	N
Template Known Secondary structure															T	T		T	T	S		T	T	S	B	G	G	G																T	T				S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																								.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.
Query Sequence		T	L	V	L	V	L	N	R	F	D	E	I	P	E	F	V	Q	F	A	G	V	L	.	.	.	.	.	.	A	D	C	T	L	A	E	T	G	A	K	E	E	L	L	Q	Q	A	L	V	A	Q	L	A	H	S	E	Q	L	E	G	V	Q	L	P	E	P	D	E	P	S	A	R	H	A	L	P	A	N	E	P	R
Query Conservation																								.	.	.	.	.	.
Alig confidence														.										.	.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Conservation														.																																																												.	.	.	.	.	.	.	.
Template Sequence		T	L	I	V	V	E	H	D	E	D	T	I	.	E	H	A	D	W	I	V	D	I	G	P	G	A	G	E	H	G	G	R	I	V	H	S	G	P	Y	D	E	L	L	R	N	K	D	S	I	T	G	A	Y	L	S	G	R	E	S	I	E	I	P	A	I	R	R	S	V	D	P	R	.	.	.	.	.	.	.	.
Template Known Secondary structure							B							.		T		S						S	S	S	S	G	G	G			S														S	S									T	S							S	S						T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																																																												.	.	.	.	.	.	.	.
Template SS confidence
		554	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		I	V	L	N	N	G	V	V	S	Y	N	D	R	P	I	L	N	N	L	S	W	Q	V	N	P	G	E	H	W	Q	I	V	G	P	N	G	A	G	K	S	T	L	L	S	.	.	L	V	T	G	D	H	P	Q	G	Y	S	N	D	L	T	L	F	G	R	R	R	G	S	G	E	T	I	W	D	I	K	K	H	I
Query Conservation																																														.	.
Alig confidence		.	.	.																																										.	.							.																						.	.
Template Conservation		.	.	.																																																		.																						.	.
Template Sequence		.	.	.	R	Q	L	T	V	V	G	A	R	E	H	N	L	R	G	I	D	V	S	F	P	L	G	V	L	T	S	V	T	G	V	S	G	S	G	K	S	T	L	V	N	D	I	L	A	A	V	L	A	.	N	R	L	N	G	A	R	Q	V	P	G	R	H	T	R	V	T	G	L	D	Y	.	.	L	D	K	L
Template Known Secondary structure		.	.	.	S									S	T	T			S							S	S	S							S	T	T	S	S								T							.			T	S								S	S						G	G	G	.	.
Template Predicted Secondary structure		.	.	.																																																		.																						.	.
Template SS confidence
					625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.		.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.			.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	V	S	S	S	L	H	L	D	Y	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	D	K	I	R	T	L	F	A	A	T	N	E	A	K	V	R	G	Y	K	P	G	R	F	S	F	N	V	K	G	G	R	C	E	A	C	T	G	D	G	T	I	K	I	E	M	N	F	L	P	D	V	Y	V	P	C	E	V
Template Known Secondary structure							S		S		S	S	T	T		S						T											T	S					T	T	T			G	G	G	S		T	T	S	T	T	T	B		S	S	S	T	T	S	S							S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
																	351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	T	T	V	R	N	V	I	L	S	G	Y	F	D	S	I	G	I	Y	Q	A	V	S	D	R	Q	Q	K	L	V	Q	Q	W	L	D	I	L	G	I	D	K	R	T	A	D	A	P	F	H	S	L	S	W	G	Q	Q	R	L	A	L	I	V	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation																																													.	.
Template Sequence		C	Q	G	A	R	Y	N	R	E	T	L	E	V	H	Y	K	G	K	T	V	S	E	V	L	D	M	S	I	E	E	A	A	E	F	F	E	P	I	A	G	V	H	R	.	.	Y	L	R	T	L	V	D	V	G	L	G	Y	V	R	L	G	Q	P	A	P	T	L	S	G	G	E	A	Q	R	V	K	L	A	S	E
Template Known Secondary structure		T	T	S		S	B						T			B	T	T	B							T	S	B								S	T	T							.	.								S	S		S	S	S	B	T	T			G	G	G	S
Template Predicted Secondary structure																																													.	.
Template SS confidence
		779	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.			.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.
		416	.	.	.				420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.							.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure						.	.	.																																																										.	.	.	.	.	.
Query SS confidence						.	.	.																																																										.	.	.	.	.	.
Query Sequence		L	V	K	H	.	.	.	P	T	L	L	I	L	D	E	P	L	Q	G	L	D	P	L	N	R	Q	L	I	R	R	F	V	D	V	L	I	S	E	G	E	T	Q	L	L	F	V	S	H	H	A	E	D	A	P	A	C	I	T	H	R	L	E	F	V	.	.	.	.	.	.	P	D	G	G	L	Y	R	Y	V	L
Query Conservation						.	.	.																																																										.	.	.	.	.	.
Alig confidence						.	.	.																																		.															.	.								.	.	.	.	.	.
Template Conservation																																										.															.	.
Template Sequence		L	Q	K	R	S	T	G	R	T	V	Y	I	L	D	E	P	T	T	G	L	H	F	D	D	I	R	K	L	L	N	V	I	N	G	L	V	D	K	G	N	.	T	V	I	V	I	E	H	N	L	D	V	I	K	T	.	.	S	D	W	I	I	D	L	G	P	E	G	G	A	G	G	G	T	V	V	A	Q	G	T
Template Known Secondary structure		S	S	S				S	S							S	S	S	T	T																				T		.															.	.		S							S	S	S	T	T	S		S						S
Template Predicted Secondary structure																																										.															.	.
Template SS confidence
		857	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.		.	.	.	900	.	.	.	.	.	.	.	.	.	910			.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.
		487	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		934	.