Return to main results Retrieve Phyre Job Id

Job DescriptionP31060
Confidence99.86%DateThu Jan 5 11:46:56 GMT 2012
Rank64Aligned Residues160
% Identity11%Templatec2j41A_
PDB info PDB header:transferaseChain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of staphylococcus aureus guanylate2 monophosphate kinase
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  NAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEII
Query Conservation    

   


 








  
 
      
 
   
                                          
Alig confidence 












































...































Template Conservation   

    
 
 







   
                      ...    
         
                 
Template Sequence  EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMREG. . . EVDGVDYFFKTRDAFEALIKDDQFIEYAEYVG
Template Known Secondary structure 




STTS

TT






S


TT...

BTTTB

TT
TT
Template Predicted Secondary structure 























...





Template SS confidence 















































































   4.....10.........20.........30.........40........ .50.........60.........70.........80
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  QDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGI
Query Conservation               
    
          




 


 

 

   
 







  

      
   
  
   
 
Alig confidence 













.........





































..............




Template Conservation                .........      

 
          
   
  
 




  

..............     
Template Sequence  NYYGTPVQYVKDTM. . . . . . . . . DEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSKEVE. . . . . . . . . . . . . . MMNLY
Template Known Secondary structure  .........TT


GGG
TTS



GGG..............GGGG
Template Predicted Secondary structure 



.........











..............


Template SS confidence 















































































   81........90.... .....100.........110.........120.........130.. .....
 
   187..190.........200.........210..
Predicted Secondary structure 








Query SS confidence 

























Query Sequence  TLVLVLNRFDEIPEFVQFAGVLADCT
Query Conservation 


 


    
    
 
 

  
 
Alig confidence 

























Template Conservation     

   
  
      

      
Template Sequence  DYVVVNDEVELAKNRIQCIVEAEHLK
Template Known Secondary structure  S
SST
Template Predicted Secondary structure 




Template SS confidence 

























   165....170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions