Job Description P31060 Confidence 100.00% Date Thu Jan 5 11:46:56 GMT 2012 Rank 38 Aligned Residues 215 % Identity 22% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		S	S	L	Q	I	L	Q	G	T	F	R	L	S	D	.	.	T	K	T	L	Q	L	P	Q	L	T	L	N	A	G	D	S	W	A	F	V	G	S	N	G	S	G	K	S	A	L	A	R	A	L	A	G	E	L	P	L	L	K	G	E	R	Q	S	Q	F	S	H	I	T	R	L	S	F	E	Q	L	Q	K	L	V
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		G	R	I	D	I	D	H	V	S	F	Q	Y	N	D	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	N	Q	I
Template Known Secondary structure													S		S	S	S			S										T	T								S	T	T	S	S						T	T	T	T	T	S	S			S							T	T			G	G	G	S								T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	E	W	Q	R	N	N	T	D	M	L	G	P	G	E	D	D	T	G	R	T	T	A	E	I	I	Q	D	E	V	K	D	A	P	R	C	M	Q	L	A	Q	Q	F	G	I	T	A	L	L	D	R	R	F	K	.	.	.	.	.	.	.	.	.	.	.	Y	L	S	T	G	E	T	R	K	T	L	L	C	Q
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		G	L	V	Q	Q	D	N	I	L	F	S	D	T	V	K	E	N	I	L	.	.	.	.	.	.	.	L	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R
Template Known Secondary structure						S	S					S	S	B						G	.	.	.	.	.	.	.	G	G		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.								.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	S	E	P	D	L	L	I	L	D	E	P	F	D	G	L	D	V	A	S	R	Q	Q	L	A	E	R	L	A	S	L	H	Q	S	G	I	T	L	V	L	V	L	N	R	F	D	E	I	P	E	F	V	Q	F	A	G	V	L	A	D	C	T	L	A	E	T	G	A	K	E	E	L	L	Q	Q
Query Conservation
Alig confidence																																					.																.
Template Conservation																																					.																.
Template Sequence		I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	K	.	D	R	T	T	L	I	V	A	H	R	L	S	T	I	T	.	H	A	D	K	I	V	V	I	E	N	G	H	I	V	E	T	G	T	H	R	E	L	I	A	K
Template Known Secondary structure								S						S	T	T	T	T																	T	T	.	T	S							S	S	G	G	G	T	T	.	T		S							T	T														T
Template Predicted Secondary structure																																					.																.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions