Return to main results Retrieve Phyre Job Id

Job DescriptionP37903
Confidence19.12%DateThu Jan 5 11:57:44 GMT 2012
Rank39Aligned Residues100
% Identity13%Templatec3exaD_
PDB info PDB header:transferaseChain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  RTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLP
Query Conservation 
 


 

 
 
  
  

  
  

      
  


                                          
Alig confidence 

















....









...

























.......











Template Conservation    

 
 







 

....  

     
...





 



 








  
  ....... 






   
Template Sequence  EKLVAIVGPTAVGKTKTS. . . . VXLAKRLNGE. . . VISGDSXQVYRGXDIGTAKITAEEXD. . . . . . . GVPHHLIDIKDP
Template Known Secondary structure 


TTSS....TTT...

TTTTBTT

TTTT


T.......T

SSS
B
T
Template Predicted Secondary structure 







....


...














.......





Template SS confidence 















































































   3......10.........20 .........30 .........40.........50...... ...60........
 
   83......90.........100.........110......
Predicted Secondary structure 












Query SS confidence 

































Query Sequence  TDRVHVHVEEGSPKDRILELAKKIPAHMIIIASH
Query Conservation                             


 
  
Alig confidence 

































Template Conservation   
  

  
   
   
  
   
  







Template Sequence  SESFSVADFQDLATPLITEIHERGRLPFLVGGTG
Template Known Secondary structure  TS


TT



Template Predicted Secondary structure 











Template SS confidence 

































   6970.........80.........90.........100..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions