 |
Job Description | P52696 | Confidence | 59.70% | Date | Thu Jan 5 12:06:00 GMT 2012 |
Rank | 291 | Aligned Residues | 63 |
% Identity | 16% | Template | d1in4a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Helicase DNA-binding domain
|
Resolution | 1.60 |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
|
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | L | S | S | M | K | A | F | V | I | L | A | E | S | S | . |
. |
S | F | N | N | A | A | K | L | L | N | I | T | Q | P | A | L | T | R | R | I | K | K | M | E | E | D | L | H | V | Q | L | F | E | R | T | T | R | K | V | T | L | T | K | A | G | K | R | L | L |
Query Conservation |   |
|
|
|   |   |
|   |   |
|   |   |
|   |   |   |   | . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |   |
| . | . |   |
|   |
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
F | D | R | K | I | L | K | T | I | I | E | I | Y | R | G | G | P | V | G | L | N | A | L | A | A | S | L | G | V | E | A | D | T | L | S | E | V | Y | E | P | Y | L | L | Q | A | G | . |
. |
F | L | A | R | T | P | R | G | R | I | V | T | E | K | A | Y | K | H | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
| B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  | T |  |  |  |  |  |  | T | T | . | . | S |  |  |  |  | T | T |  |  |  |  |
|  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | |
|
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|