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Job DescriptionP52696
Confidence99.62%DateThu Jan 5 12:06:00 GMT 2012
Rank35Aligned Residues199
% Identity15%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  HRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLA
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Template Sequence  PQGVLSVDSAXPXVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIE. . . . . RKVDIALRAGDDSGLRARHLFDSRFRVI
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TT

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   91........100.........110.........120.........130....... ..140.........150.........160.....
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  CRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHA
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Template Sequence  ASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDND
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SSGGGGGGS
B
SS
GGGG
TTS



SSSSTTS
B
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   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   251... .....260.........270.........280.........290....
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Query Sequence  PYSS. . IIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLW
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Template Sequence  IAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEEL
Template Known Secondary structure  TSS
TTTB



GGGGG

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   248.250.........260.........270.........280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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