|   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
. | . | . | . | . | . | . | |
|
|
|
|
. | . | 90 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
I | Q | L | S | A | D | H | G | D | L | Q | L | S | G | A | S | V | Y | F | K | A | A | R | S | A | S | . |
. |
. |
Q | S | L | N | I | P | S | . |
. |
. |
. |
. |
E | I | K | E | . |
. |
. |
. |
. |
. |
G | Q | T | T | D | W | I | N | I | N | S | D | N | D | N | K | R | C | V | S | . |
. |
. |
. |
K | I | T | F | S |
Query Conservation |   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |
| . | . | . |
|
|
|   |
|   |   | . | . | . | . | . |   |
|   |   | . | . | . | . | . | . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   | . | . | . | . |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   | . |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|   |
Template Sequence |   |
V | N | I | Q | F | R | R | . |
K | T | T | V | K | T | L | C | I | Y | A | D | Y | K | S | D | E | S | Y | T | P | S | K | I | S | V | R | V | G | N | N | F | H | N | L | Q | E | I | R | Q | L | E | L | V | E | P | S | G | W | I | H | V | P | L | T | D | N | H | K | K | P | T | R | T | F | M | I | Q | I | A | V | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |  |  |  |  |  |  |  | S | S | T | T | S |
|  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |
| B |
| T | T | S | S | B |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
117 | . | . | 120 | . | . | . | . | |
|
. | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | T | V | N | S | S | D | . |
. |
M | A | T | L | K | I | I | G | D |
Query Conservation |   |
|   |
|   |   |
|
|   | . | . |   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |   |
|
|   |
|   |
|   |
|
|
Template Sequence |   |
A | N | H | Q | N | G | R | D | T | H | M | R | Q | I | K | I | Y | T | P |
Template Known Secondary structure |   |
 |  | G | G | G |
| S | S |
|  |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |