Return to main results Retrieve Phyre Job Id

Job DescriptionP28696
Confidence15.64%DateThu Jan 5 11:45:09 GMT 2012
Rank6Aligned Residues15
% Identity27%Templatec3zvkG_
PDB info PDB header:antitoxin/toxin/dnaChain: G: PDB Molecule:antitoxin of toxin-antitoxin system vapb; PDBTitle: crystal structure of vapbc2 from rickettsia felis bound to2 a dna fragment from their promoter
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........
Predicted Secondary structure 






Query SS confidence 














Query Sequence  AARSASQSLNIPSEI
Query Conservation 
 

 



 
   
Alig confidence 














Template Conservation 
 

 









Template Sequence  FMNGQSQAVRLPKEF
Template Known Secondary structure  TT


GGG
Template Predicted Secondary structure 





Template SS confidence 














   7..10.........20.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions