Job Description P28696 Confidence 2.45% Date Thu Jan 5 11:45:09 GMT 2012 Rank 92 Aligned Residues 78 % Identity 14% Template c2xetB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:f1 capsule-anchoring protein; PDBTitle: conserved hydrophobic clusters on the surface of the caf1a usher2 c-terminal domain are important for f1 antigen assembly Resolution 1.60 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																				.	.	.	.																							.	.	.	.
Query SS confidence																				.	.	.	.																							.	.	.	.
Query Sequence		G	A	I	A	M	P	R	N	E	T	N	D	L	A	L	K	L	P	.	.	.	.	V	C	R	I	V	K	R	I	Q	L	S	A	D	H	G	D	L	Q	L	S	G	A	.	.	.	.	S	V	Y	F	K	A	A	R	S	A	S	Q	S	L	N	I	P	S	E	I	K	E	G	Q	T	T	D	W	I	N	I	N
Query Conservation																				.	.	.	.																							.	.	.	.
Alig confidence																				.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		G	R	L	F	L	H	L	K	R	S	D	N	K	P	V	P	F	G	S	I	V	T	I	E	G	Q	S	S	S	S	G	I	V	G	D	N	S	G	V	Y	L	T	G	L	P	K	K	S	K	I	L	V	K	W	G	R	D	K	N	Q	S	C	S	S	N	V	V	L	P	E	K	T	D	I	S	G	A	Y	R	L
Template Known Secondary structure											T	T	S		B			T	T						T	T	S	S	S							T	T	S						S			S								S		S	S	T	T	S										S			S			S
Template Predicted Secondary structure
Template SS confidence
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
		102	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	N	D	N	K	R	C	V	S
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		S	.	.	.	.	T	T	C	I	L
Template Known Secondary structure			.	.	.	.
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		804					.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions