Job Description P0ABH4 Confidence 95.43% Date Thu Jan 5 11:15:30 GMT 2012 Rank 1 Aligned Residues 154 % Identity 11% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																																																.	.
Query SS confidence																								.	.																																																.	.
Query Sequence		Y	R	S	Q	G	R	W	V	I	W	L	S	F	L	I	A	L	L	L	Q	I	M	.	.	P	W	P	D	N	L	I	V	F	R	P	N	W	V	L	L	I	L	L	Y	W	I	L	A	L	P	H	R	V	N	V	G	T	G	F	V	M	G	A	I	L	D	L	I	S	G	S	.	.	T	L	G	V	R	V	L
Query Conservation																								.	.																																																.	.
Alig confidence																								.	.																																																.	.
Template Conservation
Template Sequence		Q	Q	N	K	R	L	I	T	I	S	M	L	S	A	I	A	F	V	L	T	F	I	K	F	P	I	P	F	L	P	P	Y	L	T	L	D	F	S	D	V	P	S	L	L	A	T	F	T	F	G	P	V	A	G	I	I	V	A	L	V	K	N	L	L	N	Y	L	F	S	M	G	D	P	V	G	P	F	A	N	F
Template Known Secondary structure																				T	T	T						T	T	S		S	S					G	G	G								T	T	S																				T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130											.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	S	I	I	A	Y	L	V	A	L	K	Y	Q	L	F	R	N	L	A	L	W	Q	Q	A	L	V	V	M	L	L	S	L	V	V	D	I	I	V	F	W	A	E	F	L	V	I	N	V	S	F	.	.	.	.	.	.	.	.	.	.	R	P	E	V	F	W	S	S	V	V	N	G	V	L	W	P	W	I	F
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	.	N	K	R	S	T	K	S	L	I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L	Y
Template Known Secondary structure																S	.	S	S		S																								T	T	T	T	T
Template Predicted Secondary structure																	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	R	K	V	R	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L	A	N	F	L	K	R
Template Known Secondary structure			T	T					T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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