Job Description P0ABH4 Confidence 2.44% Date Thu Jan 5 11:15:30 GMT 2012 Rank 24 Aligned Residues 94 % Identity 14% Template c2ksfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein kdpd; PDBTitle: backbone structure of the membrane domain of e. coli2 histidine kinase receptor kdpd, center for structures of3 membrane proteins (csmp) target 4312c Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		R	S	Q	G	R	W	V	I	W	L	S	F	L	I	A	L	L	L	Q	I	M	P	W	P	D	N	L	I	V	F	R	P	N	W	V	L	L	I	L	L	Y	W	I	L	A	L	P	H	R	V	N	V	G	T	G	F	V	M	G	A	I	L	D	L	I	S	G	S	T	L	G	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	Q	G	S	V	V	A	A	A	L	S	A	V	I	T	L	I	A	M	Q	W	L	M	A	F	D	A	A	N	L	V	M	L	Y	L	L	G	V	V	V	V	A	L	F	Y	G	R	W	P	S	V	V	A	T	V	I	N	V	V	S	F	D	L	F	F	I	A	P	R	G	T	L	A	V	S	D	V	Q	Y
Template Known Secondary structure			S	S	S																				S	T	T	S	S			S	S															S	S				S													T	T	S		S	S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	R	V	L	A	M	S	I	I	A	Y	L	V	A	L	K	Y	Q	L	F	R	N	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	L	T	F	A	V	M	L	T	V	G	L	V	I	G	N	L	T	A	G	V	R	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions