Return to main results Retrieve Phyre Job Id

Job DescriptionP18335
Confidence100.00%DateThu Jan 5 11:36:49 GMT 2012
Rank35Aligned Residues345
% Identity30%Templated2cfba1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60.........70.........80.........90........ .100...
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Query Sequence  EFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATF. AERVV
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Template Sequence  PIVFDHVKGAHIWDVDGNQYIDYVGSWGPAIVGHAHPEVIDALHAALEKGTSFG. . APCLLENILAEMVIAAVPSVEMVR
Template Known Secondary structure 


BTTT

SSTTTTT
TT
BT
TT
S

S..S


SS
S
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   1920.........30.........40.........50.........60.........70.. .......80.........90......
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  FMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVM
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Template Sequence  FVNSGTEACMAVLRLMRAYTQ. . . . . . REKVIKFEGCYHGHA. . . . . . . . . . . . . . . . . . . . . ATLTAPYNDLEAVSRLF
Template Known Secondary structure  SST......

T





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   97..100.........110....... ..120.........130.. .......140.........
 
   184 .....190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  D. . . DHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGG
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Template Sequence  EQYPNDIAGVILEPVVGNAGFIPPDAGFLEGLRELTKQYGALLVFDEVMTGF. RIAYGGAQEKFGVTPDLTTLGKVIGGG
Template Known Secondary structure  STTT
SSB
SSS
B


TTTT
TTTTT.TT
TTT


S
GGGGTT
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   178.180.........190.........200.........210.........220......... 230.........240.........250......
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  FPISAMLTTAEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGL
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Template Sequence  LPVGAYGGRAEIMKMVAPA. . GPTLSGNPLAMTAGIKTLEILSRPGSYEHLDRITGKLVQGLLDAAREFGHEVCGGHISG
Template Known Secondary structure  S


TTS
TT..






TSTTTTT


TT
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   257..260.........270..... ....280.........290.........300.........310.........320.........330....
 
   341........ 350.........360.........370.........380.........390.........400...
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Query Sequence  LIGAELKPQ. . . . . . . . . . . YKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKV
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Template Sequence  MFGLFFTAGPVTNYEQAKQSDLKKFAAFHRGMLEQGIYLAPSQ. . FEAGFTSLAHTEADIERTIAAARTVLSQL
Template Known Secondary structure  SSS


SSTTS
TT

SST..TS


TT

TT
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   340.........350.........360.........370.........380.. .......390.........400.........410.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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