Job Description P18335 Confidence 99.96% Date Thu Jan 5 11:36:49 GMT 2012 Rank 101 Aligned Residues 337 % Identity 18% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.																									.
Query SS confidence																																							.	.	.	.	.	.																									.
Query Sequence		K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	.	.	.	.	.	.	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	R	V	.	V	F	M	N	S	G	T	E	A	N	E	T
Query Conservation																																							.	.	.	.	.	.																									.
Alig confidence																																							.	.	.	.	.	.																									.
Template Conservation
Template Sequence		Q	N	L	P	A	H	K	A	F	L	G	G	G	V	R	S	H	H	V	P	P	V	V	Q	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	G	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E
Template Known Secondary structure		T	S				T	T					S	S															T	S								S			S	G	G	G																				T	S	S				S		B	S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P
Query Conservation
Alig confidence												.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		G	V	L	L	A	L	R	E	T	G	.	.	.	.	.	.	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	.	.	.	.	.	.	.	.	.	L	L	T	L	P	L	E	G	G	R	T	P	L	P	E	V	G	E	E	V	G	A	V	V	V	Q	N
Template Known Secondary structure											T	.	.	.	.	.	.								T	T	S															T	T			.	.	.	.	.	.	.	.	.							B	T	T	B								T	T								S
Template Predicted Secondary structure												.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S
Query Conservation
Alig confidence			.									.	.	.	.
Template Conservation			.									.	.	.	.
Template Sequence		P	.	N	F	L	G	A	L	E	D	.	.	.	.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V
Template Known Secondary structure		S	.		T	T	S	B				.	.	.	.											T	T									T	T	G	G	G	T	S							T		S							T	T	T	T				G	G	G		S									G	G	G	G
Template Predicted Secondary structure			.									.	.	.	.
Template SS confidence
		205		.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280																														.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	H	P	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L	H	A	L
Template Known Secondary structure		G	G			S									T	T	S									G	G	G	S					G	G	G	S	S					S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.						.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		D	Q	Q	Y	D	V	F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	.	.	.	.	.	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V
Query Conservation																																																.	.	.	.	.
Alig confidence																							.	.																								.	.	.	.	.
Template Conservation																							.	.
Template Sequence		L	L	E	V	P	G	V	R	P	F	T	P	K	P	F	F	N	E	F	A	L	.	.	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L	H	E	E	E	D	L	L	A	L	R	E	A	L	K	E	V	L
Template Known Secondary structure			T	T	S	T	T					S		S	S	B		S					.	.			S	S												T	T									T	T	S		S	S								T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions