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Job DescriptionP18335
Confidence99.96%DateThu Jan 5 11:36:49 GMT 2012
Rank101Aligned Residues337
% Identity18%Templated1wyua1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70........ .80.........90.........100.. .......110....
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Query Sequence  KEYVDFAGGIAVTALGHCHPALVNALKTQGETLWHIS. . . . . . NVFTNEPALRLGRKLIEATFAERV. VFMNSGTEANET
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Template Sequence  QNLPAHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAE
Template Known Secondary structure  TS


TT



SS






TS

S

SGGG
TSS
S
BSS
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   60.........70.........80.........90.........100.........110.........120.........130.........
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  AFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEP
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Template Sequence  GVLLALRETG. . . . . . RMGVLVSQGVHPEYRAVLRAYLEAVGAK. . . . . . . . . LLTLPLEGGRTPLPEVGEEVGAVVVQN
Template Known Secondary structure  T......

TTS
TT
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BTTB






TTS
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   140......... 150.........160.........170....... ..180.........190.........200....
 
   195....200.........210.........220.........230.........240.........250.........260.........270....
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Query Sequence  IQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIAS
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Template Sequence  P. NFLGALED. . . . LGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFV
Template Known Secondary structure  S.
TTSB


....TT


TTGGGTS

T
S
TTTT


GGG
S


GGGG
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   205 ....210... ......220.........230.........240.........250.........260.........270.........
 
   275....280 .........290.........300.........310.........320.....
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Query Sequence  AFHPGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . HGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKI
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Template Conservation                                                 
  
   
   
  

          
  
   
Template Sequence  RQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHAL
Template Known Secondary structure  GG

S


TTS


GGGSGGGSS



S

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   280.........290.........300.........310.........320.........330.........340.........350.........
 
   326...330.........340.........350.........360.........370. ........380.........390.........400
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Query Sequence  DQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNA. . . . . GPDVMRFAPSLVVEDADIDEGMQRFAHAV
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Template Sequence  LLEVPGVRPFTPKPFFNEFAL. . ALPKDPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL
Template Known Secondary structure  TTSTT

S
SSB
S..
SS
TT





TTS
SS

TT


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   360.........370.........380 .........390.........400.........410.........420.........430.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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