Job Description P18335 Confidence 100.00% Date Thu Jan 5 11:36:49 GMT 2012 Rank 16 Aligned Residues 376 % Identity 40% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	I	L	P	I	Y	A	P	A	E	F	I	P	V	K	G	Q	G	S	R	I	W	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	L	D	S	G	V	Y	N	K	H	D	L	L	I	V	R	G	Q	G	A	R	V	W	D	A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	L	P	T	P	M	R	G	E	F	Y	R	T	L
Template Known Secondary structure					S		S		S				S	S							B	T					T	T	S						S	S					T		T	T		B	T																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		94	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		I	E	A	T	F	A	E	.	.	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V
Query Conservation									.	.
Alig confidence									.	.																									.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.
Template Sequence		T	A	I	L	P	P	E	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A	H	T	G	.	.	.	.	.	.	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P	V	E	F	I
Template Known Secondary structure				T	S		T	T								S	S																	S	.	.	.	.	.	.								T	T					S	S						T								G	G	G		S		S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Y	N	D	V	E	A	L	K	R	A	V	D	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G	M	G	R	T	G	K	R	F	A	F	E	H	F	G	I	V	P	D	I	L
Template Known Secondary structure			T	T											T	T								S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V
Query Conservation
Alig confidence																																																																												.	.
Template Conservation																																																																												.	.
Template Sequence		T	L	A	K	A	L	G	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A	A	E	L	G	P	W	F	M	E	K	L	R	A	I	.	.	P	S	P	K
Template Known Secondary structure					G	G	G	G	T	T	S	S													T	S		T	T	S	S			S	S	T	T																			T	T																	T	S	.	.			T	T
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	A	.	.	.	A	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	A	G	P	T	V	I	R	F	L	P	P	L	V	I	E	K	E	D	L	E	R	V	V	E	A	V	R	A	V	L
Template Known Secondary structure									T	T							S	S		S	.	.	.																		S	S	T	T								T	T
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions