Return to main results Retrieve Phyre Job Id

Job DescriptionP18335
Confidence99.97%DateThu Jan 5 11:36:49 GMT 2012
Rank73Aligned Residues370
% Identity13%Templated1c7ga_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60... ......70.........80.........
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Query Sequence  YAPAEFIPVKGQGSRIWDQQGKEYVDFAGGIAVTALGHCHPAL. . . . . . . . . . . VNALKTQGETLWHISNVFTNEPALRL
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Template Sequence  YPAEPFRIKSVETVSMISRDERVKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMMIGDEAYAG. . SENFYHL
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   3......10.........20.........30.........40.........50.........60.........70... ......80
 
   90.........100.........110.........120.........130.........140.........150........ .160.......
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Query Sequence  GRKLIEATFAERVVFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYS. . DGFGPKPAD
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Template Sequence  EKTVKELFGFKHIVPTHQGRGAENLLSQLAI. . . . . . . . . KPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLN
Template Known Secondary structure 

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GGGG
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   81........90.........100.........110. ........120.........130.........140.........150.
 
   168.170.........180... ......190.........200.........210.........220.........230 .
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Query Sequence  IIHVPFNDLHAVKAVM. . . . DDHTCAVVVEPIQGEGGVTAATPEFLQGLRELCDQHQALLVFDEVQC. . . . . . . . . . . . G
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Template Sequence  LPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAG
Template Known Secondary structure 
S
TT
B

GGGSSBTTTTSB


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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   232.......240.........250.........260.........270.........280......... 290.........300....
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Query Sequence  MGRTGDLFAYMHYGVTPDILTSAKALGGGFPISAMLTTAEIASAFHPGSHGSTYGGNP. . . . . . . LACAVAGAAFDIINT
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Template Conservation                   
    
  
      

 
                                 
 
  
     
Template Sequence  YENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ
Template Known Secondary structure 
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TT
STTTTT

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   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   305....310.........320.........330.........340.........350.. .......360.........370..
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Query Sequence  PEVLEGIQAKRQRFVDHLQKIDQQYDVFSDIRGMGLLIGAELKPQYKG. . . . . RARDFLYAGAEAGVMVLNAG. . . . . . .
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Template Sequence  YEYIEHRVKQVRYLGDKLREA. . GVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRS
Template Known Secondary structure  T..T

B
SS

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   312.......320.........330.. .......340.........350.........360.........370.........380.........
 
   373...... 380.........390.........400...
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Query Sequence  . . . . . . . . . . PDVMRFA. PSLVVEDADIDEGMQRFAHAVAKV
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Template Sequence  KETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK
Template Known Secondary structure  SSS

B


S



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TTG
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   390.........400.........410.........420.........430.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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