Job Description P18335 Confidence 100.00% Date Thu Jan 5 11:36:49 GMT 2012 Rank 40 Aligned Residues 355 % Identity 17% Template c3tqxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-amino-3-ketobutyrate coenzyme a ligase; PDBTitle: structure of the 2-amino-3-ketobutyrate coenzyme a ligase (kbl) from2 coxiella burnetii Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																					.																										.	.	.	.	.
Query SS confidence																																					.																										.	.	.	.	.
Query Sequence		P	A	E	F	I	P	V	K	G	Q	G	S	R	I	W	D	Q	Q	G	K	E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	.	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	.	.	.	.	.	N	E	P	A	L	R	L	G	R	K	L	I	E	A
Query Conservation																																					.																										.	.	.	.	.
Alig confidence																.													.	.	.						.																										.	.	.	.	.
Template Conservation																.													.	.	.
Template Sequence		K	S	E	R	I	I	T	S	P	Q	N	A	E	I	.	K	V	G	E	K	E	V	L	N	F	C	A	.	.	.	N	N	Y	L	G	L	A	D	H	P	A	L	I	K	T	A	Q	T	V	V	E	Q	Y	G	F	G	X	A	S	V	R	F	I	C	G	T	Q	T	I	H	K	E	L	E	K	D	I	S	E	F
Template Known Secondary structure							B		S		S	S	S			.			T	T							S	S	.	.	.			T	T	S		T	T																	S				S
Template Predicted Secondary structure																.													.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y	A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Sequence		L	G	T	D	D	T	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	.	.	.	.	.	.	.	.	.	L	L	G	P	E	D	A	I	I	S	D	E	L	N	H	A	S	I	I	D	G	I	R	L	C	K	A	Q	R	Y	R	Y	K	N	N	A	X	.	.	.	.	.	.	G	D	L	E	A	K
Template Known Secondary structure			T		S						S								T	T				.	.	.	.	.	.	.	.	.				T	T							T	T											S			S							T	T		T	.	.	.	.	.	.	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T	A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	.	.	.	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S
Query Conservation																																																																	.	.	.
Alig confidence																														.	.	.	.																																.	.	.
Template Conservation																														.	.	.	.
Template Sequence		L	K	E	A	D	E	K	G	A	R	F	K	L	I	A	T	D	G	V	F	S	X	D	G	I	I	A	D	.	.	.	.	L	K	S	I	C	D	L	A	D	K	Y	N	A	L	V	X	V	D	D	S	H	A	V	G	F	I	G	E	N	G	R	G	T	P	E	Y	C	G	V	A	D	R	V	D	I	L	T	G
Template Known Secondary structure							T	T	T		S	S							S			T	T	T	T					.	.	.	.											T	T								T	T	T	T	T	T	S	S	T	T	S								T		T	T			S
Template Predicted Secondary structure																														.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		254	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		A	K	A	L	G	.	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G	S	T	Y	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		T	L	G	K	A	L	G	G	A	S	G	G	Y	T	S	G	H	K	E	I	I	E	W	L	R	N	R	S	R	P	Y	L	F	S	N	T	V	A	P	V	I	V	A	T	S	L	K	V	L	E	L	L	K	T	E	G	P	Q	L	R	K	Q	L	Q	E	N	S	R	Y	F	R	A	G	X	E	K	L	G	F	Q
Template Known Secondary structure			S	S	S	S	S		S	S																								S	S																					T																							T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.								370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		S	D	I	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R	D	F	L	Y	A	G	A	E	A	G	V	M	V	L	.	.	.	.	.	.	.	N	A	G	P	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K	V
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence			.													.	.																						.	.	.	.	.	.	.
Template Conservation			.													.	.
Template Sequence		L	.	V	P	G	N	H	P	I	I	P	V	X	L	.	.	G	D	A	Q	L	A	T	N	X	A	D	H	L	L	Q	E	G	I	Y	V	V	G	F	S	Y	P	V	V	P	X	G	K	A	R	I	R	V	Q	X	S	A	V	H	T	Q	Q	Q	L	D	R	A	I	E	A	F	G	Q	V	G	K	K	L
Template Known Secondary structure		B	.				S	S	S							.	.																T	T								T	T	T	S		T	T										T	T																				T
Template Predicted Secondary structure			.													.	.
Template SS confidence
		319		320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions