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Job DescriptionP18335
Confidence99.93%DateThu Jan 5 11:36:49 GMT 2012
Rank162Aligned Residues347
% Identity10%Templatec3rq1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of aminotransferase class i and ii from veillonella2 parvula
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QGKE. YVDFAGGIAVTALGH. . CHPALVNALKTQGET. . LWHISNVFTNEPALRLGRKLIEATFA. . . ERVVFMNSGTEA
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Template Sequence  NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGG
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GGG


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Query Sequence  NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVV
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Template Sequence  IHHLIHN. . . . . . . . YTEPGDEVLTADWYWGAYRVIC. SDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIF
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Query Sequence  VEPIQGEGGVTAATPEFLQGLRELCDQ. . . . . . HQALLVFDEVQCGMGRTGDLFAYMHYGVT. . . . . . . . PDILTSAKAL
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Template Sequence  NTPGNNPTG. YSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF
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Query Sequence  G. GGFPISAMLTT. . . . . . . AEIASAFHPGSHGSTYGGNPLACAVAGAAFDIINT. . . . PEVLEGIQAKRQRFVDHLQKI
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Template Sequence  TXYGQRVGAXIGISDDEEIADEFFEVNKSTSRATWSNICRPAXRTXANIVADPAKFKEYEAERNCYYQLIRDRADIFKQE
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Query Sequence  DQQYDVFSDIRGMGLLIGAELKPQYKGRARDFLYAGAEAGVMVLNAGPDVMRFAPSLVVEDADIDEGMQRFAHAVAKV
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Template Sequence  AAQVGLPXLPYRGGFFITIPTD. . . . . SANAICEELKKEHIYVIALA. NGIRIAAC. GIPKCQXTGLAEKIYNAXKSL
Template Known Secondary structure  T






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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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