Job Description P18335 Confidence 99.82% Date Thu Jan 5 11:36:49 GMT 2012 Rank 220 Aligned Residues 319 % Identity 10% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	V	D	F	A	G	G	I	A	V	T	A	L	G	H	C	H	P	A	L	V	N	A	L	K	T	Q	G	E	T	L	W	H	I	S	N	V	F	T	N	E	P	A	L	R	L	G	R	K	L	I	E	A	T	F	A	E	R	V	V	F	M	N	S	G	T	E	A	N	E	T	A	F	K	L	A	R	H	Y
Query Conservation
Alig confidence										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Sequence		Q	V	F	N	F	S	S	G	.	.	P	A	M	L	.	.	.	P	A	E	V	L	K	L	A	Q	Q	E	V	.	.	.	.	.	.	.	.	.	.	A	E	E	A	E	Q	D	F	R	D	L	L	N	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G	V	P	.	.	.	.	.	.
Template Known Secondary structure								S	S	.	.	S				.	.	.									T				.	.	.	.	.	.	.	.	.	.													T			T	T								S		T	T								.	.	.	.	.	.
Template Predicted Secondary structure										.	.					.	.	.													.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10			.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.											.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	V	R	H	S	P	F	K	T	K	I	I	A	F	H	N	A	F	H	G	R	S	L	F	T	V	S	V	G	G	Q	P	K	Y	S	D	G	F	G	P	K	P	A	D	I	I	H	V	P	F	N	D	L	H	A	V	K	A	V	M	D	D	H	T	C	A	V	V	V	E	P	I	Q	G	E	G	G	V	T
Query Conservation
Alig confidence		.	.																																																	.	.	.	.
Template Conservation		.	.																																																	.	.	.	.
Template Sequence		.	.	L	N	L	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	.	.	.	.	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	P	N	E	T	I	D	G	I	A
Template Known Secondary structure		.	.					T	T									S	S											T	T	T	S												T	T						.	.	.	.		G	G	G					T	T		S						S			T	T	T	T
Template Predicted Secondary structure		.	.																																																	.	.	.	.
Template SS confidence
				85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	T	P	E	F	L	Q	G	L	R	E	L	C	D	Q	H	Q	A	L	L	V	F	D	E	V	Q	C	G	M	G	R	T	G	D	L	F	A	Y	M	H	Y	G	V	T	P	D	I	L	T	S	A	K	A	L	G	G	G	F	P	I	S	A	M	L	T	T	A	E	I	A	S	A	F	H	P	G	S	H	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																		.	.	.	.	.																						.
Template Conservation							.	.	.	.	.	.	.	.																		.	.	.	.	.																						.
Template Sequence		I	D	E	T	P	.	.	.	.	.	.	.	.	D	F	G	P	E	V	V	V	T	A	D	F	S	S	T	I	L	.	.	.	.	.	S	A	P	L	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	.	P	A	G	L	T	L	V	I	V	R	E	D	L	L	G	K	A	H	E	S	C	P	S
Template Known Secondary structure							.	.	.	.	.	.	.	.				T	T								T	T	T	T	T	.	.	.	.	.	S	S				G	G	G		S						T	T	T	T	T		.		T	T								G	G	G		S				T	T	S		G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																		.	.	.	.	.																						.
Template SS confidence
		159	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		283	.	.						.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																																																			.	.
Query SS confidence					.	.	.	.	.																																																			.	.
Query Sequence		S	T	Y	.	.	.	.	.	G	G	N	P	L	A	C	A	V	A	G	A	A	F	D	I	I	N	T	P	E	V	L	E	G	I	Q	A	K	R	Q	R	F	V	D	H	L	Q	K	I	D	Q	Q	Y	D	V	F	S	D	I	.	.	R	G	M	G	L	L	I	G	A	E	L	K	P	Q	Y	K	G	R	A	R
Query Conservation					.	.	.	.	.																																																			.	.
Alig confidence					.	.	.	.	.																																																			.	.
Template Conservation
Template Sequence		I	L	D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	N	T	L	D	K
Template Known Secondary structure		G	G											S																T																						T		S	S					B		G	G	G	B		S	S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		D	F	L	Y	A	G	A	E	A	G	V	M	V	L	N	A	G	P	.	.	D	V	M	R	F	A	P	S	L	V	V	E	D	A	D	I	D	E	G	M	Q	R	F	A	H	A	V	A	K
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		V	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R
Template Known Secondary structure										T	T					B			T	T	T		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions